RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 SUN1O94901 812 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 UNC5CO95185 931 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 GRPP07492 148 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 MYF5P13349 255 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 PTGER1P34995 402 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 NBPF8Q3BBV2 869 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 CCAR1Q8IX12 1150 aaKnown RBP4.3□□□□□ -1.72
PALB2-204ENST00000566069 PCSK9Q8NBP7 692 aaKnown RBP4.3□□□□□ -1.72
PALB2-204ENST00000566069 FAM46DQ8NEK8 389 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 OR6B3Q8NGW1 331 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 POC1BQ8TC44 478 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
PALB2-204ENST00000566069 APIPQ96GX9 242 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 BTBD1Q9H0C5 482 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 HESX1Q9UBX0 185 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 TPCN1Q9ULQ1 816 aa4.3□□□□□ -1.72
PALB2-204ENST00000566069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
PALB2-204ENST00000566069 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 TOR1BO14657 336 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 BMP15O95972 392 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 MYL1P05976 194 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 BRAFP15056 766 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 PHKG2P15735 406 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 KELP23276 732 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 VIPR2P41587 438 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 HNRNPMP52272 730 aaKnown RBP eCLIP4.29□□□□□ -1.72
PALB2-204ENST00000566069 FOXG1P55316 489 aaPredicted RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 RPS7P62081 194 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 MC2RQ01718 297 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 GRM1Q13255 1194 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 DYRK1AQ13627 763 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 TXNRD1Q16881 649 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 NOL8Q76FK4 1167 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 ADGRG5Q8IZF4 528 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 KRT78Q8N1N4 520 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 PSD4Q8NDX1 1056 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 NSUN7Q8NE18 718 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 LRIG1Q96JA1 1093 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 MRPS18AQ9NVS2 196 aaKnown RBP4.29□□□□□ -1.72
PALB2-204ENST00000566069 PCDHGB6Q9Y5F9 930 aa4.29□□□□□ -1.72
PALB2-204ENST00000566069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.29□□□□□ -1.72
PALB2-204ENST00000566069 USP19O94966 1318 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 SPATA31A3Q5VYP0 1347 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 A0A087WWL8 130 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 WDR27A2RRH5 827 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 BTN3A1O00481 513 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 TBC1D4O60343 1298 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 ATXN1LP0C7T5 689 aaKnown RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 SLC11A2P49281 568 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 TOB1P50616 345 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 SUMO3P55854 103 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 WNT3P56703 355 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 SLC13A2Q13183 592 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 RAB32Q13637 225 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 HLXQ14774 488 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 SAFBQ15424 915 aaKnown RBP eCLIP4.28□□□□□ -1.72
PALB2-204ENST00000566069 CNGA2Q16280 664 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 SLC44A4Q53GD3 710 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 COBLL1Q53SF7 1204 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 LMBRD2Q68DH5 695 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 PJA1Q8NG27 643 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 SNX19Q92543 992 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 MAML1Q92585 1016 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 TMEM125Q96AQ2 219 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 NMD3Q96D46 503 aaKnown RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 MOGAT1Q96PD6 335 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 HAPLN3Q96S86 360 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 WACQ9BTA9 647 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 NUP62CLQ9H1M0 184 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 SMURF2Q9HAU4 748 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 ARNT2Q9HBZ2 717 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 INTS13Q9NVM9 706 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 XPR1Q9UBH6 696 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 AFF4Q9UHB7 1163 aaKnown RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 OGDHLQ9ULD0 1010 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.28□□□□□ -1.72
PALB2-204ENST00000566069 TMX2Q9Y320 296 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 RAD54BQ9Y620 910 aa4.28□□□□□ -1.72
PALB2-204ENST00000566069 ANO9A1A5B4 782 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 TRIM43BA6NCK2 446 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 MYO1CO00159 1063 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 ORC4O43929 436 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
PALB2-204ENST00000566069 VPS4BO75351 444 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 CYP2C9P11712 490 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 ITGALP20701 1170 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 CCKBRP32239 447 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 NPTX2P47972 431 aa4.27□□□□□ -1.73
PALB2-204ENST00000566069 GCLCP48506 637 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms