RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SIGLEC16A6NMB1 481 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ZWINTO95229 277 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 EPHB2P29323 1055 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 PHBP35232 272 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 RAP1GAPP47736 663 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 OSTNP61366 133 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 NLRP9Q7RTR0 991 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 LONP2Q86WA8 852 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 PALM2Q8IXS6 379 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 TMEM130Q8N3G9 435 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 FAM71DQ8N9W8 422 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 FAM13CQ8NE31 585 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 MZB1Q8WU39 189 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ACO2Q99798 780 aaKnown RBP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ACSS3Q9H6R3 686 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 SIP14410 1827 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ICAM3P32942 547 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 PSMC1P62191 440 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 SEPT7Q16181 437 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 BBS12Q6ZW61 710 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 DCAKDQ8WVC6 231 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 INPP5DQ92835 1189 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF668Q96K58 619 aaPredicted RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 XYLT2Q9H1B5 865 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 NRBP2Q9NSY0 501 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 OGTO15294 1046 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 WFS1O76024 890 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 UBA1P22314 1058 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 RFC5P40937 340 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 STAT5BP51692 787 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 CDR2LQ86X02 465 aaPredicted RBP16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 THNSL1Q8IYQ7 743 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 RFWD2Q8NHY2 731 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 SPDL1Q96EA4 605 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 DHRS4Q9BTZ2 278 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
GTF3C1-205ENST00000564747 NDC80O14777 642 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 KRT7P08729 469 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 CDH8P55286 799 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 HADHQ16836 314 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 IGDCC3Q8IVU1 814 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 BANPQ8N9N5 519 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 KCTD6Q8NC69 237 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 PTPRN2Q92932 1015 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 CPXM1Q96SM3 734 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 SSU72Q9NP77 194 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 XPO7Q9UIA9 1087 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 ZFP69BQ9UJL9 534 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 CPSF3Q9UKF6 684 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 CHMP2BQ9UQN3 213 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 EFR3BQ9Y2G0 817 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 SPDYE16A6NNV3 312 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 E7ESA3 106 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 C2CD2LO14523 706 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 MAFO75444 373 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 HOXC6P09630 235 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 YWHAEP62258 255 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 BASP1P80723 227 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 GRM1Q13255 1194 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 RFX6Q8HWS3 928 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 CEP120Q8N960 986 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 TTC13Q8NBP0 860 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 RNF149Q8NC42 400 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 C12orf42Q96LP6 360 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 FETUBQ9UGM5 382 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 AFG3L2Q9Y4W6 797 aa16.21■□□□□ 0.19
GTF3C1-205ENST00000564747 ABLIM1O14639 778 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 PEX11AO75192 247 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 POLR2BP30876 1174 aaKnown RBP16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 FYB2Q5VWT5 728 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 LRRC71Q8N4P6 559 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 HSPH1Q92598 858 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 RNPEPL1Q9HAU8 725 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 ZNF112Q9UJU3 913 aa16.21■□□□□ 0.18
GTF3C1-205ENST00000564747 PRKCBP05771 671 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 MARK3P27448 753 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 CCNG1P51959 295 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 EFNA5P52803 228 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 EIF3EP60228 445 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 LAMTOR4Q0VGL1 99 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 TAZQ16635 292 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 KLHL38Q2WGJ6 581 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 PDIK1LQ8N165 341 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 LCTP09848 1927 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms