RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 LLGL1Q15334 1064 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 SRSF7Q16629 238 aaKnown RBP eCLIP3.82□□□□□ -1.8
CHD9-211ENST00000564600 LAYNQ6UX15 382 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 DAAM2Q86T65 1068 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 IL31RAQ8NI17 732 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 ATRIPQ8WXE1 791 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 R3HDM4Q96D70 268 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 MTFMTQ96DP5 389 aaKnown RBP3.82□□□□□ -1.8
CHD9-211ENST00000564600 SMURF2Q9HAU4 748 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 STK32BQ9NY57 414 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 PADI4Q9UM07 663 aa3.82□□□□□ -1.8
CHD9-211ENST00000564600 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
CHD9-211ENST00000564600 BTN3A1O00481 513 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 SLC16A3O15427 465 aaKnown RBP3.81□□□□□ -1.8
CHD9-211ENST00000564600 FAM163BP0C2L3 166 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 ENGP17813 658 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 CYP4F2P78329 520 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 NFE2Q16621 373 aaPredicted RBP3.81□□□□□ -1.8
CHD9-211ENST00000564600 PTCHD3Q3KNS1 767 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 ANO6Q4KMQ2 910 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 AMOTQ4VCS5 1084 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 ZNF618Q5T7W0 954 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 DEPDC1Q5TB30 811 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 ZNF66Q6ZN08 573 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 HASPINQ8TF76 798 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 RAPGEF4Q8WZA2 1011 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 NELL2Q99435 816 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 C22orf23Q9BZE7 217 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 DUSP22Q9NRW4 184 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 PIH1D1Q9NWS0 290 aaKnown RBP3.81□□□□□ -1.8
CHD9-211ENST00000564600 DDX20Q9UHI6 824 aaKnown RBP3.81□□□□□ -1.8
CHD9-211ENST00000564600 TMX2Q9Y320 296 aa3.81□□□□□ -1.8
CHD9-211ENST00000564600 TISP43B9A030 160 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 TBX3O15119 743 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 CTNND1O60716 968 aaKnown RBP3.8□□□□□ -1.8
CHD9-211ENST00000564600 PDE8BO95263 885 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 PRKCGP05129 697 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 CELA2AP08217 269 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 NDUFB7P17568 137 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 KCNA3P22001 575 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 SOX10P56693 466 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 KLF9Q13886 244 aaPredicted RBP3.8□□□□□ -1.8
CHD9-211ENST00000564600 PROSER3Q2NL68 480 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 FAM153CQ494X1 144 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 PLAC9Q5JTB6 97 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 SFRP4Q6FHJ7 346 aaPredicted RBP3.8□□□□□ -1.8
CHD9-211ENST00000564600 APOA5Q6Q788 366 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 ZDHHC24Q6UX98 284 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 NAPRTQ6XQN6 538 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 DPY19L3Q6ZPD9 716 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 TMEM171Q8WVE6 324 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 DPH1Q9BZG8 443 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 SH3BP4Q9P0V3 963 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 SNX14Q9Y5W7 946 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 EID1Q9Y6B2 187 aa3.8□□□□□ -1.8
CHD9-211ENST00000564600 A0A1W2PPL8 197 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 SMIM22K7EJ46 135 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 MYO1FO00160 1098 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 TLR5O60602 858 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 NXPH3O95157 252 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 LATS1O95835 1130 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 ALDH9A1P49189 494 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 DGKEP52429 567 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 EEFSECP57772 596 aaKnown RBP3.79□□□□□ -1.8
CHD9-211ENST00000564600 SLC13A2Q13183 592 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 E2F2Q14209 437 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 CYP1B1Q16678 543 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 PLA1AQ53H76 456 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 FAM102BQ5T8I3 360 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 DCAF12L1Q5VU92 463 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 MAEAQ7L5Y9 396 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 GAS2L3Q86XJ1 694 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 KIAA0319LQ8IZA0 1049 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 LRRC71Q8N4P6 559 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 SEMA6DQ8NFY4 1073 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 OR56A3Q8NH54 315 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 KBTBD7Q8WVZ9 684 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 XAGE5Q8WWM1 108 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 LENG8Q96PV6 779 aaPredicted RBP3.79□□□□□ -1.8
CHD9-211ENST00000564600 SH2D3AQ9BRG2 576 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 MS4A7Q9GZW8 240 aaPredicted RBP3.79□□□□□ -1.8
CHD9-211ENST00000564600 GLOD4Q9HC38 313 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 GBA2Q9HCG7 927 aaPredicted RBP3.79□□□□□ -1.8
CHD9-211ENST00000564600 CPNE7Q9UBL6 633 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 SHOC2Q9UQ13 582 aa3.79□□□□□ -1.8
CHD9-211ENST00000564600 THP07101 528 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 EN2P19622 333 aaPredicted RBP3.78□□□□□ -1.8
CHD9-211ENST00000564600 FPR3P25089 353 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 SLC7A1P30825 629 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 PDE1AP54750 535 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 CNN3Q15417 329 aaKnown RBP3.78□□□□□ -1.8
CHD9-211ENST00000564600 ETFDHQ16134 617 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 MTX3Q5HYI7 312 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 PCID2Q5JVF3 399 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 LMBRD2Q68DH5 695 aaPredicted RBP3.78□□□□□ -1.8
CHD9-211ENST00000564600 SLC9A4Q6AI14 798 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 CEP85Q6P2H3 762 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms