RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 THEM5Q8N1Q8 247 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 EXD1Q8NHP7 514 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 RBM41Q96IZ5 413 aaKnown RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 FAM193BQ96PV7 902 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 DPEP3Q9H4B8 488 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 ASNSD1Q9NWL6 643 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 SMARCAL1Q9NZC9 954 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 STIM2Q9P246 746 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 NME7Q9Y5B8 376 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 PCDHB7Q9Y5E2 793 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 ENPP3O14638 875 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 XPO1O14980 1071 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 TRAPPC3O43617 180 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 PQBP1O60828 265 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 NBNO60934 754 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 RNF8O76064 485 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 ZRANB2O95218 330 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 KRT7P08729 469 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 PYGMP11217 842 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 TNFRSF8P28908 595 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 PLA2G4AP47712 749 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 CLCN6P51797 869 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 AFF1P51825 1210 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 SLC6A3Q01959 620 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 PDE4CQ08493 712 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 MAPRE1Q15691 268 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 FAM102AQ5T9C2 384 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 IFT20Q8IY31 132 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 ABI1Q8IZP0 508 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 LINC01599Q8WXQ3 324 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 SUSD3Q96L08 255 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 KRT12Q99456 494 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 SYT15Q9BQS2 421 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 LRRC1Q9BTT6 524 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 DUSP16Q9BY84 665 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 METTL5Q9NRN9 209 aaKnown RBP16.38■□□□□ 0.21
COMMD4-210ENST00000564587 HOMER3Q9NSC5 361 aa16.38■□□□□ 0.21
COMMD4-210ENST00000564587 E5RJQ4 531 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 FSCN2O14926 492 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 CXCL10P02778 98 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 GPD1P21695 349 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 ADORA2BP29275 332 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 CHRNA3P32297 505 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 RFC1P35251 1148 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-210ENST00000564587 SSR1P43307 286 aaKnown RBP16.37■□□□□ 0.21
COMMD4-210ENST00000564587 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 ZNF143P52747 638 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-210ENST00000564587 DSC1Q08554 894 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-210ENST00000564587 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 PMF1Q6P1K2 205 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 SLC2A14Q8TDB8 520 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 KCTD13Q8WZ19 329 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 PNKPQ96T60 521 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 MRPL9Q9BYD2 267 aaKnown RBP16.37■□□□□ 0.21
COMMD4-210ENST00000564587 UBXN6Q9BZV1 441 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 HIPK3Q9H422 1215 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 PCDHB8Q9UN66 801 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 USTQ9Y2C2 406 aa16.37■□□□□ 0.21
COMMD4-210ENST00000564587 DPYSL4O14531 572 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 SART1O43290 800 aaKnown RBP16.36■□□□□ 0.21
COMMD4-210ENST00000564587 PHF2O75151 1096 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-210ENST00000564587 FAM200BP0CF97 657 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 CCDC130P13994 396 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 NPR3P17342 541 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 RFC2P35250 354 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 PCK1P35558 622 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
COMMD4-210ENST00000564587 RNASELQ05823 741 aaKnown RBP16.36■□□□□ 0.21
COMMD4-210ENST00000564587 DHX34Q14147 1143 aaKnown RBP16.36■□□□□ 0.21
COMMD4-210ENST00000564587 EFHC1Q5JVL4 640 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 CLLU1OSQ5K130 101 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 KLHL7Q8IXQ5 586 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 C3orf58Q8NDZ4 430 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 MYCBPAPQ8TBZ2 947 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 MED10Q9BTT4 135 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 AP1M1Q9BXS5 423 aa16.36■□□□□ 0.21
COMMD4-210ENST00000564587 FAM187AA6NFU0 413 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 GJB6O95452 261 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-210ENST00000564587 PTPN7P35236 360 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 RGS7P49802 495 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 TAS2R40P59535 323 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 VSNL1P62760 191 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 OGDHQ02218 1023 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms