RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TBC1D30Q9Y2I9 924 aa6□□□□□ -1.45
UBR1-205ENST00000564540 FRMD4BQ9Y2L6 1034 aa6□□□□□ -1.45
UBR1-205ENST00000564540 A1L4Q6 167 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 CFAP69A5D8W1 941 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 MANSC4A6NHS7 340 aaPredicted RBP5.99□□□□□ -1.45
UBR1-205ENST00000564540 H0YIZ8 118 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 MYO1FO00160 1098 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 TBC1D4O60343 1298 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 HNRNPCP07910 306 aaKnown RBP eCLIP5.99□□□□□ -1.45
UBR1-205ENST00000564540 CYP2C9P11712 490 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 EN2P19622 333 aaPredicted RBP5.99□□□□□ -1.45
UBR1-205ENST00000564540 ADORA2AP29274 412 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 CYP2C18P33260 490 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 ATXN1P54253 815 aaKnown RBP5.99□□□□□ -1.45
UBR1-205ENST00000564540 SOX10P56693 466 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 WNT3P56703 355 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 PLA1AQ53H76 456 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 DEPDC1Q5TB30 811 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 APOA5Q6Q788 366 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 ANKS1AQ92625 1134 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 R3HDM4Q96D70 268 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 GLOD4Q9HC38 313 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 STK32BQ9NY57 414 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 DLL3Q9NYJ7 618 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 CPNE7Q9UBL6 633 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 AOX1Q06278 1338 aa5.99□□□□□ -1.45
UBR1-205ENST00000564540 ZNF213O14771 459 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 ERC2O15083 957 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 FAM163BP0C2L3 166 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 LRPAP1P30533 357 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 DGKEP52429 567 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 MGAT5BQ3V5L5 792 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 DCAF12L1Q5VU92 463 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 FCRLBQ6BAA4 426 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 SLC15A3Q8IY34 581 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 MYO1HQ8N1T3 1032 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 DPF1Q92782 380 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 SERGEFQ9UGK8 458 aa5.98□□□□□ -1.45
UBR1-205ENST00000564540 WIPF3A6NGB9 483 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 VSTM5A8MXK1 200 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 VNN1O95497 513 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
UBR1-205ENST00000564540 ENGP17813 658 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 KCNA3P22001 575 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 PDE6CP51160 858 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 PDE1AP54750 535 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 SUMO3P55854 103 aaPredicted RBP5.97□□□□□ -1.45
UBR1-205ENST00000564540 SATB1Q01826 763 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 LY6KQ17RY6 165 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 TMEM119Q4V9L6 283 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 LRRC71Q8N4P6 559 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 OR56A3Q8NH54 315 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 XAGE5Q8WWM1 108 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 NAF1Q96HR8 494 aaKnown RBP5.97□□□□□ -1.45
UBR1-205ENST00000564540 FAM204AQ9H8W3 233 aa5.97□□□□□ -1.45
UBR1-205ENST00000564540 TARM1B6A8C7 271 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 QSOX1O00391 747 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.46
UBR1-205ENST00000564540 TFF2Q03403 129 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 RAB32Q13637 225 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 GRM3Q14832 879 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 ANKRD16Q6P6B7 361 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 C14orf80Q86SX3 495 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 MICU3Q86XE3 530 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 FAM156AQ8NDB6 213 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 BPIFB1Q8TDL5 484 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 HASPINQ8TF76 798 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 TMEM171Q8WVE6 324 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 OSCP1Q8WVF1 389 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 REPS1Q96D71 796 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.46
UBR1-205ENST00000564540 MACROD1Q9BQ69 325 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 ZNF518BQ9C0D4 1074 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 DUSP22Q9NRW4 184 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 SACM1LQ9NTJ5 587 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 SH3BP4Q9P0V3 963 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 KLHL42Q9P2K6 505 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 TPCN1Q9ULQ1 816 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 SH2B3Q9UQQ2 575 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 SNX14Q9Y5W7 946 aa5.96□□□□□ -1.46
UBR1-205ENST00000564540 MARCH6O60337 910 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 ONECUT2O95948 504 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 BRAFP15056 766 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 PRKAG1P54619 331 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 FOXF2Q12947 444 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 PTCHD3Q3KNS1 767 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 C3orf38Q5JPI3 329 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 AARS2Q5JTZ9 985 aaKnown RBP5.95□□□□□ -1.46
UBR1-205ENST00000564540 PCID2Q5JVF3 399 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 ZDHHC24Q6UX98 284 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 CCDC149Q6ZUS6 474 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 SLC29A4Q7RTT9 530 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 WDR53Q7Z5U6 358 aaPredicted RBP5.95□□□□□ -1.46
UBR1-205ENST00000564540 FANCBQ8NB91 859 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 DDB2Q92466 427 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 TBC1D5Q92609 795 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 PPP2R3CQ969Q6 453 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 BHMT2Q9H2M3 363 aa5.95□□□□□ -1.46
UBR1-205ENST00000564540 GBA2Q9HCG7 927 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms