RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 SCYL1Q96KG9 808 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TMEM221A6NGB7 291 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.73e-6■■□□□ 12.4
MACF1-231ENST00000564288 ACAD10Q6JQN1 1059 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF677Q86XU0 584 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TMEM35BQ8NCS4 154 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZFP28Q8NHY6 868 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 USP17L12C9JPN9 530 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 USP17L21D6R901 530 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 NR2F2P24468 414 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 NT5C1BQ96P26 610 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 RMDN3Q96TC7 470 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TEX51A0A1B0GUA7 166 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TRIM24O15164 1050 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CCDC130P13994 396 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CCND2P30279 289 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 AKAP14Q86UN6 197 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 LRRC4BQ9NT99 713 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 H7C0C1 242 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 SH3BP5O60239 455 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ATP5OP48047 213 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 THOP1P52888 689 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TBC1D10BQ4KMP7 808 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 PDCD6IPQ8WUM4 868 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 EEF2KMTQ96G04 330 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PLEKHA8Q96JA3 519 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 MRPL39Q9NYK5 338 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 PNMA3Q9UL41 463 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PCDHB2Q9Y5E7 798 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 NOS1APO75052 506 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 RARBP10826 455 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PLS1Q14651 629 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 SAMD4BQ5PRF9 694 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 WDR59Q6PJI9 974 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 SPARTQ8N0X7 666 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 SGF29Q96ES7 293 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 EIF4E1BA6NMX2 242 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 GCNT3O95395 438 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TCIRG1Q13488 830 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF568Q3ZCX4 644 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CCSAPQ6IQ19 270 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF589Q86UQ0 364 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 MTMR7Q9Y216 660 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PPRC1Q5VV67 1664 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 CCDC78A2IDD5 438 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ITM2AO43736 263 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TRIM49P0CI25 452 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TRIM49CP0CI26 452 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 FAM172AQ8WUF8 416 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 IPPQ9Y573 584 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 DLGAP3O95886 979 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 C8BP07358 591 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CYP11B2P19099 503 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ITIH1P19827 911 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 NMT1P30419 496 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 XRRA1Q6P2D8 792 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TMEM139Q8IV31 216 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 BEGAINQ9BUH8 593 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PLA2G12BQ9BX93 195 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF609O15014 1411 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 RXRBP28702 533 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ERVK-9P63128 1117 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 VAC14Q08AM6 782 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 NR5A1Q13285 461 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 MYBPC3Q14896 1274 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CLPPQ16740 277 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 STX12Q86Y82 276 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PPIL6Q8IXY8 311 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 GSPT2Q8IYD1 628 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 PRPF19Q9UMS4 504 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 ERVV-1B6SEH8 477 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PMLP29590 882 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TUFMP49411 452 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 MSLNQ13421 630 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 PACSIN1Q9BY11 444 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ADNPQ9H2P0 1102 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 HPS4Q9NQG7 708 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ILVBLA1L0T0 632 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 GAS2O43903 313 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 TMBIM6P55061 237 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 OXCT1P55809 520 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 KCNT1Q5JUK3 1230 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ABRAXAS1Q6UWZ7 409 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ASRGL1Q7L266 308 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 KRT73Q86Y46 540 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 FAM8A1Q9UBU6 413 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 CNOT11Q9UKZ1 510 aaKnown RBP4.42□□□□□ -1.7
MACF1-231ENST00000564288 ADGRA2Q96PE1 1338 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 PPM1LQ5SGD2 360 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 EXD1Q8NHP7 514 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 ZNF347Q96SE7 839 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 TEX12Q9BXU0 123 aa4.42□□□□□ -1.7
MACF1-231ENST00000564288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms