RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 VN1R3Q9BXE9 311 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 ZBP1Q9H171 429 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
CLK3-214ENST00000564096 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
CLK3-214ENST00000564096 TAS2R14Q9NYV8 317 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
CLK3-214ENST00000564096 WDR35Q9P2L0 1181 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 PCDHB5Q9Y5E4 795 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 CDY1Q9Y6F8 540 aa13.55□□□□□ -0.24
CLK3-214ENST00000564096 A0A0A6YYK5 440 aaPredicted RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 C2CD2LO14523 706 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 TRIM66O15016 1216 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 KIF5CO60282 957 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 CFHP08603 1231 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 CTSAP10619 480 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 GPD2P43304 727 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 PLA2G4AP47712 749 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 NDUFV1P49821 464 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 ARPP19P56211 112 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 GPC5P78333 572 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 GPR17Q13304 367 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 PKDCCQ504Y2 493 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 SLC8B1Q6J4K2 584 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 DNAJC24Q6P3W2 148 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 ZDHHC17Q8IUH5 632 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 MCOLN2Q8IZK6 566 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 B3GNT5Q9BYG0 378 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 THAP2Q9H0W7 228 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 PNPLA8Q9NP80 782 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 AVENQ9NQS1 362 aaPredicted RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 ENTPD7Q9NQZ7 604 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 UVRAGQ9P2Y5 699 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
CLK3-214ENST00000564096 LCMT1Q9UIC8 334 aa13.54□□□□□ -0.24
CLK3-214ENST00000564096 TNRC18O15417 2968 aaPredicted RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 SART1O43290 800 aaKnown RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 TBC1D4O60343 1298 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 DESP17661 470 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 DNAJB2P25686 324 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 MAGEA11P43364 429 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 GSCP56915 257 aaPredicted RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 TAP1Q03518 808 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 PDE4CQ08493 712 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 TPGS2Q68CL5 300 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 FAM109BQ6ICB4 259 aaPredicted RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 TAS1R1Q7RTX1 841 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 SIX6OS1Q8N1H7 587 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
CLK3-214ENST00000564096 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 C18orf8Q96DM3 657 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 TMEM209Q96SK2 561 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 EMILIN2Q9BXX0 1053 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 TLR9Q9NR96 1032 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 FNIP2Q9P278 1114 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 CTTNBP2NLQ9P2B4 639 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 MAFFQ9ULX9 164 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 GUCA1BQ9UMX6 200 aa13.53□□□□□ -0.24
CLK3-214ENST00000564096 MACROD2A1Z1Q3 448 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 MTMR11A4FU01 709 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 USP27XA6NNY8 438 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 CLDN5O00501 218 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 FBXO21O94952 628 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 TUBB4AP04350 444 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 CYP1A2P05177 515 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 ADH1AP07327 375 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 BDNFP23560 247 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 MAP3K7CLP57077 242 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 ROR1Q01973 937 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 PIGZQ86VD9 579 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 REXO1L1PQ8IX06 675 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.25
CLK3-214ENST00000564096 C3orf20Q8ND61 904 aa13.52□□□□□ -0.25
CLK3-214ENST00000564096 SLC35F5Q8WV83 523 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms