RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ARL10Q8N8L6 244 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 NAT14Q8WUY8 206 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 NUMBLQ9Y6R0 609 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 MAGEB3O15480 346 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 FGFR1P11362 822 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ACOT2P49753 483 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CDK7P50613 346 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ADARP55265 1226 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 BPIFB4P59827 614 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CDK16Q00536 496 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 NCOA4Q13772 614 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 UBAP2LQ14157 1087 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 TRIM67Q6ZTA4 783 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 EURLQ9NYK6 297 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ACTL7BQ9Y614 415 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 PIK3CDO00329 1044 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 TLR3O15455 904 aaKnown RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 ADCY3O60266 1144 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 TMCC1O94876 653 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GZMAP12544 262 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 CYP11B1P15538 503 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 SREBF1P36956 1147 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 DENND1AQ8TEH3 1009 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 FAM136AQ96C01 138 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 TTC25Q96NG3 672 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 FAM213AQ9BRX8 229 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 MAD1L1Q9Y6D9 718 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 MAGEB2O15479 319 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 HNRNPCL1O60812 293 aaKnown RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 CLPTM1O96005 669 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 PEX6Q13608 980 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 ALCAMQ13740 583 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 SMTNL2Q2TAL5 461 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 OR6Y1Q8NGX8 325 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 SENP7Q9BQF6 1050 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 RNF19AQ9NV58 838 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 FAM198AQ9UFP1 575 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GAKO14976 1311 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 PEX1O43933 1283 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 CYP1A1P04798 512 aaPredicted RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GCAP28676 217 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
CCDC187-201ENST00000563590 CXCL9Q07325 125 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 PTK7Q13308 1070 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 CHI3L2Q15782 390 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 HHIPL2Q6UWX4 724 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 PLEKHO2Q8TD55 490 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 KLHL4Q9C0H6 718 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 SENP1Q9P0U3 644 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 UVRAGQ9P2Y5 699 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
CCDC187-201ENST00000563590 GAD2Q05329 585 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 TMEM62Q0P6H9 643 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 ORC1Q13415 861 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 BMPR2Q13873 1038 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CNGA3Q16281 694 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 SLC44A4Q53GD3 710 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CRLF3Q8IUI8 442 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 NUDCD3Q8IVD9 361 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 FAM71AQ8IYT1 594 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 TRIML2Q8N7C3 387 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 FBXO36Q8NEA4 188 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 ZNF408Q9H9D4 720 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 PEX2P28328 305 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 AQP4P55087 323 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CMPK2Q5EBM0 449 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 SYDE1Q6ZW31 735 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 RHOT1Q8IXI2 618 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 RNF148Q8N7C7 305 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 XXYLT1Q8NBI6 393 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 SLC16A10Q8TF71 515 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 PAIP2BQ9ULR5 123 aaKnown RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 LZTS1Q9Y250 596 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CDK5RAP2Q96SN8 1893 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 YDJCA8MPS7 323 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms