RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RSPH1Q8WYR4 309 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 PIWIL1Q96J94 861 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 RTP3Q9BQQ7 232 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 LRRC1Q9BTT6 524 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 DNAI2Q9GZS0 605 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 KANSL3Q9P2N6 904 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 ATP11BQ9Y2G3 1177 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 NR2E1Q9Y466 385 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 PCDHB7Q9Y5E2 793 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 CYP11A1P05108 521 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 ODC1P11926 461 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 TCF4P15884 667 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 GATMP50440 423 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 MDH1BQ5I0G3 518 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 DEFB128Q7Z7B8 93 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 CRIPAKQ8N1N5 446 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 CASD1Q96PB1 797 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 SYT15Q9BQS2 421 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 TBX21Q9UL17 535 aa19.02■□□□□ 0.64
COMMD4-208ENST00000563220 TET1Q8NFU7 2136 aa19.02■□□□□ 0.63
COMMD4-208ENST00000563220 MYBPHLA2RUH7 354 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PIGHQ14442 188 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 LONRF2Q1L5Z9 754 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 CC2D1AQ6P1N0 951 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 NIPA2Q8N8Q9 360 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 HDAC7Q8WUI4 952 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PAWRQ96IZ0 340 aaKnown RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 SUSD3Q96L08 255 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 B3GNT5Q9BYG0 378 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 MIS12Q9H081 205 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 DNAJB4Q9UDY4 337 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 KRIT1O00522 736 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PAPSS1O43252 624 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PAX3P23760 479 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 RPL34P49207 117 aaKnown RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 RNASELQ05823 741 aaKnown RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 OLFML1Q6UWY5 402 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 ADAT2Q7Z6V5 191 aaKnown RBP19.01■□□□□ 0.63
COMMD4-208ENST00000563220 SCUBE3Q8IX30 993 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 RHOT1Q8IXI2 618 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 ARFGAP1Q8N6T3 406 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 FNIP1Q8TF40 1166 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 VWCEQ96DN2 955 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 KRT12Q99456 494 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 DUSP16Q9BY84 665 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 RAB21Q9UL25 225 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 CDH9Q9ULB4 789 aa19.01■□□□□ 0.63
COMMD4-208ENST00000563220 PSTPIP1O43586 416 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 BEST1O76090 585 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
COMMD4-208ENST00000563220 PSMA2P25787 234 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 SSR1P43307 286 aaKnown RBP19■□□□□ 0.63
COMMD4-208ENST00000563220 OR1G1P47890 313 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 TAF5Q15542 800 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 ATP13A4Q4VNC1 1196 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 SEL1L2Q5TEA6 688 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 TRNP1Q6NT89 227 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 ZDHHC14Q8IZN3 488 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 KHSRPQ92945 711 aaKnown RBP eCLIP19■□□□□ 0.63
COMMD4-208ENST00000563220 TMEM39AQ9NV64 488 aa19■□□□□ 0.63
COMMD4-208ENST00000563220 GRAP2O75791 330 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 PLA2G4AP47712 749 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 PLCB3Q01970 1234 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 LRRC26Q2I0M4 334 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 FAM43BQ6ZT52 329 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 METTL23Q86XA0 190 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 KLHL7Q8IXQ5 586 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 ANKLE1Q8NAG6 615 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 PCED1BQ96HM7 432 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 HINFPQ9BQA5 517 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 DMGDHQ9UI17 866 aaKnown RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 LRFN2Q9ULH4 789 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 PRG3Q9Y2Y8 225 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 TDRD15B5MCY1 1934 aaKnown RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 XPO1O14980 1071 aaKnown RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 PCSK1P29120 753 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 CLCN6P51797 869 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 VSNL1P62760 191 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 SLC6A3Q01959 620 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 LLGL1Q15334 1064 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 TXNRD3NBQ6F5E7 133 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 ABI1Q8IZP0 508 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 MYCBPAPQ8TBZ2 947 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 SPATA18Q8TC71 538 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 HSFY1Q96LI6 401 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 FAM193BQ96PV7 902 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-208ENST00000563220 ACBD6Q9BR61 282 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 MED10Q9BTT4 135 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 DSEQ9UL01 958 aa18.99■□□□□ 0.63
COMMD4-208ENST00000563220 TCRBV7S2A1N4TA0A589 114 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 TARSL2A2RTX5 802 aaKnown RBP18.98■□□□□ 0.63
COMMD4-208ENST00000563220 C2CD4BA6NLJ0 364 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 TMEM189-UBE2V1I3L0A0 370 aa18.98■□□□□ 0.63
COMMD4-208ENST00000563220 ZMYND10O75800 440 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms