RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 C11orf70Q9BRQ4 267 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 DDX23Q9BUQ8 820 aaKnown RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 KIFC3Q9BVG8 833 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 NIF3L1Q9GZT8 377 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 IFT122Q9HBG6 1241 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TOPORSQ9NS56 1045 aaPredicted RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 CYP39A1Q9NYL5 469 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 PIM2Q9P1W9 311 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 PSMC3IPQ9P2W1 217 aaPredicted RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 PRKAG3Q9UGI9 489 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 USH1CQ9Y6N9 552 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 LOC102724159A0A0B4J2E5 919 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TMEM150BA6NC51 233 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SIGLEC16A6NMB1 481 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 OGTO15294 1046 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TM9SF1O15321 606 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SPINT1O43278 529 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ZNF189O75820 626 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TOMM70O94826 608 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 UPP2O95045 317 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ZBTB7AO95365 584 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 VNN1O95497 513 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 LMNAP02545 664 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TNNC2P02585 160 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ATP5BP06576 529 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 CCNB1P14635 433 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 PTPRAP18433 802 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 GLRA2P23416 452 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 STIP1P31948 543 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SLC26A2P50443 739 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ARSEP51690 589 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 YARSP54577 528 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SLC8A3P57103 927 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 GEMIN4P57678 1058 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 NLRP11P59045 1033 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 IRX3P78415 501 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 PWP2Q15269 919 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 PDK4Q16654 411 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 CCDC142Q17RM4 750 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 NOL9Q5SY16 702 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TRABD2AQ86V40 505 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 CCDC60Q8IWA6 550 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SRRM1Q8IYB3 904 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ANKRD42Q8N9B4 389 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ADAM32Q8TC27 787 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 LRRC8CQ8TDW0 803 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ATG4AQ8WYN0 398 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 INPP5DQ92835 1189 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ANKRD36BP1Q96IX9 119 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 TMEM237Q96Q45 408 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 PI4K2AQ9BTU6 479 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 HEMGNQ9BXL5 484 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ECT2Q9H8V3 914 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 NOD2Q9HC29 1040 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SAYSD1Q9NPB0 183 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ACP6Q9NPH0 428 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 FGFR1OP2Q9NVK5 253 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 EURLQ9NYK6 297 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 CHORDC1Q9UHD1 332 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-202ENST00000562602 MCM8Q9UJA3 840 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 KIAA1257Q9ULG3 409 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 GPSM3Q9Y4H4 160 aa7.87□□□□□ -1.15
CFDP1-202ENST00000562602 SSC5DA1L4H1 1573 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 hCG_1818297A0A087WSY0 165 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 CFAP69A5D8W1 941 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 B4GALT4O60513 344 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 ATP2C2O75185 946 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 UBOX5O94941 541 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 ASMTLO95671 621 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 GSTA2P09210 222 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TROVE2P10155 538 aaKnown RBP eCLIP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 KRT15P19012 456 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TAC1P20366 129 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 ATICP31939 592 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 STAT5BP51692 787 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TAS2R40P59535 323 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TNFAIP2Q03169 654 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 POU5F1BQ06416 359 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 GPS1Q13098 491 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TFDP2Q14188 446 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 STILQ15468 1287 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 TARBP2Q15633 366 aaKnown RBP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 OASLQ15646 514 aaKnown RBP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 MAPK6Q16659 721 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 HIF1AQ16665 826 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 CCDC38Q502W7 563 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 FAM133BQ5BKY9 247 aaKnown RBP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 FAM47CQ5HY64 1035 aa7.86□□□□□ -1.15
CFDP1-202ENST00000562602 RNASEH2BQ5TBB1 312 aaKnown RBP7.86□□□□□ -1.15
CFDP1-202ENST00000562602 LGSNQ5TDP6 509 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms