RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 ZNF699Q32M78 642 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 ZNF528Q3MIS6 628 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 MAMSTRQ6ZN01 415 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 FRMD5Q7Z6J6 570 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 SCN4BQ8IWT1 228 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 FAM3CQ92520 227 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 TAF4BQ92750 862 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 EHD2Q9NZN4 543 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 NXF1Q9UBU9 619 aaKnown RBP27.15■■□□□ 1.94
MSLN-203ENST00000561896 FBXO4Q9UKT5 387 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 NME7Q9Y5B8 376 aa27.15■■□□□ 1.94
MSLN-203ENST00000561896 TRIM66O15016 1216 aa27.14■■□□□ 1.94
MSLN-203ENST00000561896 PTPN1P18031 435 aaKnown RBP27.14■■□□□ 1.94
MSLN-203ENST00000561896 RPL13P26373 211 aaKnown RBP27.14■■□□□ 1.94
MSLN-203ENST00000561896 SGSM1Q2NKQ1 1148 aa27.14■■□□□ 1.94
MSLN-203ENST00000561896 ZNF667Q5HYK9 610 aa27.14■■□□□ 1.94
MSLN-203ENST00000561896 CEP135Q66GS9 1140 aa27.14■■□□□ 1.94
MSLN-203ENST00000561896 FMR1NBQ8N0W7 255 aaPredicted RBP27.14■■□□□ 1.94
MSLN-203ENST00000561896 MAB21L3Q8N8X9 362 aa27.14■■□□□ 1.94
MSLN-203ENST00000561896 NKD2Q969F2 451 aaPredicted RBP27.14■■□□□ 1.94
MSLN-203ENST00000561896 SPATA6Q9NWH7 488 aaPredicted RBP27.14■■□□□ 1.94
MSLN-203ENST00000561896 GOLGA6L4A6NEF3 574 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 TADA3O75528 432 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 SP9P0CG40 484 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 BDNFP23560 247 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 NR2F2P24468 414 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 DLG4P78352 724 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 CYP27A1Q02318 531 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 TXNDC8Q6A555 127 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 ZC3H14Q6PJT7 736 aaKnown RBP27.13■■□□□ 1.93
MSLN-203ENST00000561896 INTS8Q75QN2 995 aaKnown RBP27.13■■□□□ 1.93
MSLN-203ENST00000561896 RALGPS2Q86X27 583 aaPredicted RBP27.13■■□□□ 1.93
MSLN-203ENST00000561896 MAML2Q8IZL2 1156 aaPredicted RBP27.13■■□□□ 1.93
MSLN-203ENST00000561896 C8orf48Q96LL4 319 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 TDP1Q9NUW8 608 aa27.13■■□□□ 1.93
MSLN-203ENST00000561896 PRR23AA6NEV1 266 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 A8MXQ7 604 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 LAMTOR5O43504 91 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 VNN1O95497 513 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 P4HA1P13674 534 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 PFKLP17858 780 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 ANXA13P27216 316 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 GRIK1P39086 918 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 MCCD1P59942 119 aaPredicted RBP27.12■■□□□ 1.93
MSLN-203ENST00000561896 MDH1BQ5I0G3 518 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 DENND5BQ6ZUT9 1274 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 SV2AQ7L0J3 742 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 GPIHBP1Q8IV16 184 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 B3GALNT2Q8NCR0 500 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 STKLD1Q8NE28 680 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 USP13Q92995 863 aaPredicted RBP27.12■■□□□ 1.93
MSLN-203ENST00000561896 ELOVL4Q9GZR5 314 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 RMND1Q9NWS8 449 aa27.12■■□□□ 1.93
MSLN-203ENST00000561896 VAMP7P51809 220 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 NOP14P78316 857 aaKnown RBP27.11■■□□□ 1.93
MSLN-203ENST00000561896 EDRF1Q3B7T1 1238 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 ZCWPW2Q504Y3 356 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 ENGASEQ8NFI3 743 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 FAM83CQ9BQN1 747 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 TTLL2Q9BWV7 592 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 CHRDQ9H2X0 955 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 NDRG2Q9UN36 371 aaKnown RBP27.11■■□□□ 1.93
MSLN-203ENST00000561896 MAPK8IP1Q9UQF2 711 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 WDR87Q6ZQQ6 2873 aa27.11■■□□□ 1.93
MSLN-203ENST00000561896 AKAP3O75969 853 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 CCNE1P24864 410 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 PPP3CCP48454 512 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 PDE6CP51160 858 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 KPNA1P52294 538 aaPredicted RBP27.1■■□□□ 1.93
MSLN-203ENST00000561896 C1orf220Q5T0J3 134 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 ASCL5Q7RTU5 278 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 TNIP3Q96KP6 325 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 GSDMAQ96QA5 445 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 GTPBP4Q9BZE4 634 aaKnown RBP27.1■■□□□ 1.93
MSLN-203ENST00000561896 SMG9Q9H0W8 520 aaKnown RBP27.1■■□□□ 1.93
MSLN-203ENST00000561896 SMYD3Q9H7B4 428 aa27.1■■□□□ 1.93
MSLN-203ENST00000561896 ASS1P00966 412 aaKnown RBP27.09■■□□□ 1.93
MSLN-203ENST00000561896 CTHP32929 405 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 PSMC2P35998 433 aaKnown RBP27.09■■□□□ 1.93
MSLN-203ENST00000561896 FAM160A1Q05DH4 1040 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 ADAM9Q13443 819 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 COBLL1Q53SF7 1204 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 ZFYVE19Q96K21 471 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 TIGD1Q96MW7 591 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 DPEP3Q9H4B8 488 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 PRMT8Q9NR22 394 aaPredicted RBP27.09■■□□□ 1.93
MSLN-203ENST00000561896 GTSE1Q9NYZ3 720 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 CCL26Q9Y258 94 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 GVINP1Q7Z2Y8 2422 aa27.09■■□□□ 1.93
MSLN-203ENST00000561896 CFAP54Q96N23 3096 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 TRAV19A0A0A6YYK7 116 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 F8VP50 259 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 SPECC1L-ADORA2AF8WAN1 911 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 USP17L7P0C7H9 530 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 CHRNB1P11230 501 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 KRT13P13646 458 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 ITPRIPL2Q3MIP1 535 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 FAM186BQ8IYM0 893 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 SPATA20Q8TB22 786 aa27.08■■□□□ 1.93
MSLN-203ENST00000561896 LMAN1LQ9HAT1 526 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms