RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CDC25CP30307 473 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 GPC5P78333 572 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 SIGLEC14Q08ET2 396 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 KCNH2Q12809 1159 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 CFAP221Q4G0U5 840 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 GAREM2Q75VX8 874 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 TMC8Q8IU68 726 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 SUGP1Q8IWZ8 645 aaKnown RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 ZC3H3Q8IXZ2 948 aaKnown RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 UBALD2Q8IYN6 164 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 SIX5Q8N196 739 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 TTC8Q8TAM2 541 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 MRPS31Q92665 395 aaKnown RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 FUBP3Q96I24 572 aaKnown RBP eCLIP10.76□□□□□ -0.69
HERC1-212ENST00000561348 TWNKQ96RR1 684 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 CRACR2AQ9BSW2 395 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 NT5C1AQ9BXI3 368 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 PLA2G2FQ9BZM2 168 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 BRD9Q9H8M2 597 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 VRTNQ9H8Y1 702 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 ABCB6Q9NP58 842 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 RTN4Q9NQC3 1192 aaKnown RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 GDE1Q9NZC3 331 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 HSFX1Q9UBD0 423 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 TRIM66O15016 1216 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 MOSPD3O75425 235 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 FGF19O95750 216 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CD19P15391 556 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 GDI1P31150 447 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 AVPR1AP37288 418 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CACNA2D1P54289 1103 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 MAP3K7CLP57077 242 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CCDC183Q5T5S1 534 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
HERC1-212ENST00000561348 POTEHQ6S545 545 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 VSTM1Q6UX27 236 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 DENND5BQ6ZUT9 1274 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 HFE2Q6ZVN8 426 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 RRAGAQ7L523 313 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 ARID3BQ8IVW6 561 aaPredicted RBP10.75□□□□□ -0.69
HERC1-212ENST00000561348 SMARCD2Q92925 531 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CYFIP2Q96F07 1278 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 NT5C1BQ96P26 610 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 LRRC3Q9BY71 257 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CYP3A43Q9HB55 503 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 CISHQ9NSE2 258 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 UXTQ9UBK9 157 aaPredicted RBP10.75□□□□□ -0.69
HERC1-212ENST00000561348 RAPGEFL1Q9UHV5 662 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 PCDHB4Q9Y5E5 795 aa10.75□□□□□ -0.69
HERC1-212ENST00000561348 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 ANHXE9PGG2 379 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 GPR37L1O60883 481 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 CKMP06732 381 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 FAM163BP0C2L3 166 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 SRFP11831 508 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 KRT5P13647 590 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 HMGA1P17096 107 aaKnown RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 USP8P40818 1118 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 MAGEA11P43364 429 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 EPHA5P54756 1037 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 USP46P62068 366 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 YWHAEP62258 255 aaKnown RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 ENPEPQ07075 957 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 CUL2Q13617 745 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 UNC93AQ86WB7 457 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 FAM114A1Q8IWE2 563 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 TRIM59Q8IWR1 403 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 FUKQ8N0W3 1084 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 NXPE3Q969Y0 559 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 SMARCD1Q96GM5 515 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 CYP2S1Q96SQ9 504 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 TRMT61BQ9BVS5 477 aaKnown RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 SLC46A2Q9BY10 475 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 BCO2Q9BYV7 579 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 GPR88Q9GZN0 384 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 INTS2Q9H0H0 1204 aaKnown RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 TASP1Q9H6P5 420 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 DMAP1Q9NPF5 467 aaPredicted RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 C11orf16Q9NQ32 467 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 AVENQ9NQS1 362 aaPredicted RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 TRPM5Q9NZQ8 1165 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 GCNT4Q9P109 453 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 CHORDC1Q9UHD1 332 aaPredicted RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 DUSP12Q9UNI6 340 aa10.74□□□□□ -0.69
HERC1-212ENST00000561348 ZNF638Q14966 1978 aaKnown RBP10.74□□□□□ -0.69
HERC1-212ENST00000561348 PRR33A8MZF0 331 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 ZNF263O14978 683 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 CILPO75339 1184 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 BEST1O76090 585 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 NOL4O94818 638 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 PAPLNO95428 1278 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 CALCAP01258 141 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 FAM200BP0CF97 657 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms