RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 MAGED2Q9UNF1 606 aaPredicted RBP14.79□□□□□ -0.04
TPM1-230ENST00000561266 RNF225M0QZC1 329 aaPredicted RBP14.78□□□□□ -0.04
TPM1-230ENST00000561266 ZNF197O14709 1029 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 GNA14O95837 355 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 AFPP02771 609 aaKnown RBP14.78□□□□□ -0.04
TPM1-230ENST00000561266 ALADP13716 330 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 GRIK1P39086 918 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 VIPR2P41587 438 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 RAD23BP54727 409 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
TPM1-230ENST00000561266 TDGQ13569 410 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 CUL2Q13617 745 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 VEPH1Q14D04 833 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 MAPRE1Q15691 268 aaKnown RBP14.78□□□□□ -0.04
TPM1-230ENST00000561266 MIIPQ5JXC2 388 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 VSTM1Q6UX27 236 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 ITIH5Q86UX2 942 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 SLC4A11Q8NBS3 891 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 EHBP1Q8NDI1 1231 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 SLC2A14Q8TDB8 520 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 SLC46A2Q9BY10 475 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 IMPG2Q9BZV3 1241 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 GDE1Q9NZC3 331 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 IGSF9Q9P2J2 1179 aa14.78□□□□□ -0.04
TPM1-230ENST00000561266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.78□□□□□ -0.04
TPM1-230ENST00000561266 ZFP37Q9Y6Q3 630 aaPredicted RBP14.78□□□□□ -0.04
TPM1-230ENST00000561266 TNFRSF10BO14763 440 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 CSH1P0DML2 217 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 CSH2P0DML3 217 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 CCDC192P0DO97 292 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 SLC9A1P19634 815 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 ACO1P21399 889 aaKnown RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 ADORA2BP29275 332 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 PGFP49763 221 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 WDR44Q5JSH3 913 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 PPP1R26Q5T8A7 1209 aaPredicted RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 TXNDC8Q6A555 127 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 PHLDB3Q6NSJ2 640 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 CAVIN1Q6NZI2 390 aaKnown RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 GJB7Q6PEY0 223 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 RRAGAQ7L523 313 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 LEMD2Q8NC56 503 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 SCAMP5Q8TAC9 235 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 RIN3Q8TB24 985 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 ZSCAN18Q8TBC5 510 aaPredicted RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 SPATA17Q96L03 361 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 C8orf48Q96LL4 319 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 MYRFLQ96LU7 910 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 KREMEN1Q96MU8 473 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 SLC22A12Q96S37 553 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 ZSWIM1Q9BR11 485 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 LRFN3Q9BTN0 628 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 NT5C1AQ9BXI3 368 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 SMG9Q9H0W8 520 aaKnown RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 THAP9Q9H5L6 903 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 AJAP1Q9UKB5 411 aaPredicted RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 DUSP12Q9UNI6 340 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 KIF26AQ9ULI4 1882 aaPredicted RBP14.77□□□□□ -0.05
TPM1-230ENST00000561266 COL4A2P08572 1712 aa14.77□□□□□ -0.05
TPM1-230ENST00000561266 TICRRQ7Z2Z1 1910 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 MYO16Q9Y6X6 1858 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 TMEM221A6NGB7 291 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 HHLA1C9JL84 531 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 M0R296 226 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 P4HA2O15460 535 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 GPR37L1O60883 481 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 AP1G2O75843 785 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 PRAMEF12O95522 483 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 FGFR1OPO95684 399 aaKnown RBP14.76□□□□□ -0.05
TPM1-230ENST00000561266 GPC5P78333 572 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 SIGLEC14Q08ET2 396 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 GRM2Q14416 872 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 VITQ6UXI7 678 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 HFE2Q6ZVN8 426 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 GPRIN1Q7Z2K8 1008 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 CCDC150Q8NCX0 1101 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 CYFIP2Q96F07 1278 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 TRMT2BQ96GJ1 504 aaKnown RBP14.76□□□□□ -0.05
TPM1-230ENST00000561266 INTS2Q9H0H0 1204 aaKnown RBP14.76□□□□□ -0.05
TPM1-230ENST00000561266 HSD3B7Q9H2F3 369 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 KRT82Q9NSB4 513 aa14.76□□□□□ -0.05
TPM1-230ENST00000561266 HELZP42694 1942 aaKnown RBP14.76□□□□□ -0.05
TPM1-230ENST00000561266 KRBA1A5PL33 1030 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 CFHP08603 1231 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 MTIF2P46199 727 aaKnown RBP14.75□□□□□ -0.05
TPM1-230ENST00000561266 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TYRO3Q06418 890 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 NCAPHQ15003 741 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TAF12Q16514 161 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TPD52L1Q16890 204 aaPredicted RBP14.75□□□□□ -0.05
TPM1-230ENST00000561266 CLEC20AQ6ZU45 233 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 ARID3BQ8IVW6 561 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms