RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TADA3O75528 432 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 FGF19O95750 216 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 USP46P62068 366 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 CT47A1Q5JQC4 288 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 WDR44Q5JSH3 913 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 TMEM31Q5JXX7 168 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 FAM35AQ86V20 835 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 SMARCD2Q92925 531 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 KXD1Q9BQD3 176 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 NT5C1AQ9BXI3 368 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 GPR88Q9GZN0 384 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 ATXN3LQ9H3M9 355 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 CISHQ9NSE2 258 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPA1-213ENST00000560856 TMEM221A6NGB7 291 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 M0R296 226 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 CCDC130P13994 396 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 CD58P19256 250 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 CDC25CP30307 473 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 GRIK1P39086 918 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 RAD23BP54727 409 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 CYP4F8P98187 520 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 CUL2Q13617 745 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 BMP8AQ7Z5Y6 402 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 ZMIZ2Q8NF64 920 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 ELSPBP1Q96BH3 223 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 RSPRY1Q96DX4 576 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 KCNK16Q96T55 309 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 HNRNPABQ99729 332 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 SMOQ99835 787 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 SLC46A2Q9BY10 475 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 THAP9Q9H5L6 903 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 TASP1Q9H6P5 420 aa16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 MAGED2Q9UNF1 606 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-213ENST00000560856 DENND4CQ5VZ89 1909 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 PRR33A8MZF0 331 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 TNFRSF10BO14763 440 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 TRIM66O15016 1216 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 BEST1O76090 585 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 SRFP11831 508 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 WEE1P30291 646 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 LRMPQ12912 555 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 TAF12Q16514 161 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 GPR158Q5T848 1215 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 DENND5BQ6ZUT9 1274 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 HFE2Q6ZVN8 426 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 ARID3BQ8IVW6 561 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 ZSCAN18Q8TBC5 510 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 SLC2A14Q8TDB8 520 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 LRRC3BQ96PB8 259 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 CSNK1G1Q9HCP0 422 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 SLC2A4RGQ9NR83 387 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 IL37Q9NZH6 218 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 DACH1Q9UI36 760 aa16.22■□□□□ 0.19
SNRPA1-213ENST00000560856 PDGFBP01127 241 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 ACO1P21399 889 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 VIPR2P41587 438 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 GPC5P78333 572 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 IER5LQ5T953 404 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 VITQ6UXI7 678 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 ENOX1Q8TC92 643 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 KAT5Q92993 513 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 CYFIP2Q96F07 1278 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 SMARCD1Q96GM5 515 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 MED10Q9BTT4 135 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 ZFP14Q9HCL3 533 aa16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 UXTQ9UBK9 157 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-213ENST00000560856 SOBPA7XYQ1 873 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 HHLA1C9JL84 531 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 AP1G2O75843 785 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 PRAMEF12O95522 483 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 ANXA13P27216 316 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF394Q53GI3 561 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 ARHGAP15Q53QZ3 475 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 PPP1R26Q5T8A7 1209 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 TXNDC8Q6A555 127 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 MON1AQ86VX9 555 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 DMAP1Q9NPF5 467 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 KRT82Q9NSB4 513 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 WNT16Q9UBV4 365 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 OBSL1O75147 1896 aa16.2■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF318Q5VUA4 2279 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms