RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ABL1P00519 1130 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 BMP6P22004 513 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 ASPAP45381 313 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 CLCN5P51795 746 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 MLF2Q15773 248 aaPredicted RBP13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 IER5LQ5T953 404 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 TXNDC8Q6A555 127 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 MFSD6LQ8IWD5 586 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRIML1Q8N9V2 468 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 IRF7Q92985 503 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 SMG9Q9H0W8 520 aaKnown RBP13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 METTL14Q9HCE5 456 aaKnown RBP13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 FAM49BQ9NUQ9 324 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 RAB20Q9NX57 234 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
CTDSPL2-209ENST00000560620 NOL4O94818 638 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 F11P03951 625 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 NPR3P17342 541 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 AOC1P19801 751 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 UBXN2BQ14CS0 331 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 TPRG1Q6ZUI0 275 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 UNC93AQ86WB7 457 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 CMTM8Q8IZV2 173 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 CSGALNACT1Q8TDX6 532 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRMT2BQ96GJ1 504 aaKnown RBP13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 SPATA17Q96L03 361 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 IPO9Q96P70 1041 aaKnown RBP13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 PRRX2Q99811 253 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC46A2Q9BY10 475 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRPV4Q9HBA0 871 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 THG1LQ9NWX6 298 aaKnown RBP13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
CTDSPL2-209ENST00000560620 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 PI15O43692 258 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 LRRN2O75325 713 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 AP1G2O75843 785 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 PRAMEF12O95522 483 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CKMP06732 381 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CCDC130P13994 396 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CD72P21854 359 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 ADORA2BP29275 332 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CACNA2D1P54289 1103 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 PRKCQQ04759 706 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 C12orf29Q8N999 325 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC2A14Q8TDB8 520 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 C8orf48Q96LL4 319 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 DUSP9Q99956 384 aaKnown RBP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 NT5C1AQ9BXI3 368 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 KCNH6Q9H252 994 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 DMAP1Q9NPF5 467 aaPredicted RBP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 TDP1Q9NUW8 608 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRPM5Q9NZQ8 1165 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 KMT2EQ8IZD2 1858 aa13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZNF638Q14966 1978 aaKnown RBP13.78□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 KANSL1LA0AUZ9 987 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 DCNP07585 359 aaKnown RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 PTPRDP23468 1912 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 USP46P62068 366 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 CETN1Q12798 172 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 LRMPQ12912 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms