RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 LONP2Q86WA8 852 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 TPH2Q8IWU9 490 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 RPUSD2Q8IZ73 545 aaKnown RBP8.99□□□□□ -0.97
CCDC33-209ENST00000560565 SYCP3Q8IZU3 236 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 VPS52Q8N1B4 723 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 STKLD1Q8NE28 680 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 MGARPQ8TDB4 240 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 CD101Q93033 1021 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 ERP27Q96DN0 273 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 RBM41Q96IZ5 413 aaKnown RBP8.99□□□□□ -0.97
CCDC33-209ENST00000560565 VCPIP1Q96JH7 1222 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 ACCSQ96QU6 501 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 LXNQ9BS40 222 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 TRIM55Q9BYV6 548 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 YIPF3Q9GZM5 350 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 AP5M1Q9H0R1 490 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 UPF3AQ9H1J1 476 aaKnown RBP8.99□□□□□ -0.97
CCDC33-209ENST00000560565 VPS11Q9H270 941 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 PSMC3IPQ9P2W1 217 aaPredicted RBP8.99□□□□□ -0.97
CCDC33-209ENST00000560565 POLIQ9UNA4 740 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 SORCS3Q9UPU3 1222 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 ATP11BQ9Y2G3 1177 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 Q9Y3F1 56 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 PPME1Q9Y570 386 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 ASB3Q9Y575 518 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 UNC79Q9P2D8 2635 aa8.99□□□□□ -0.97
CCDC33-209ENST00000560565 A0A1W2PQ45 241 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 A0A1W2PQY0 241 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 MYADML2A6NDP7 307 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 H0YCG3 227 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 CREB3O43889 395 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ATP9AO75110 1047 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 FKBP6O75344 327 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 CSDE1O75534 798 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 HAUS5O94927 633 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ATG7O95352 703 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ACSL3O95573 720 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ASMTLO95671 621 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ASGR1P07306 291 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 SYN1P17600 705 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 CST5P28325 142 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 PTDSS1P48651 473 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 RPS6KA3P51812 740 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 CYP4A11Q02928 519 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 MCL1Q07820 350 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 AP1B1Q10567 949 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 MORF4L2Q15014 288 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 DBN1Q16643 649 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 LONRF1Q17RB8 773 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 SLC5A9Q2M3M2 681 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 TRMT5Q32P41 509 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 DUSP28Q4G0W2 176 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 HSP90AA5PQ58FG0 334 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 C1orf53Q5VUE5 145 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 TRIM68Q6AZZ1 485 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 CCSAPQ6IQ19 270 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 RINT1Q6NUQ1 792 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 TMEM154Q6P9G4 183 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 METTL7BQ6UX53 244 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 TLK2Q86UE8 772 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ECHDC2Q86YB7 292 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 RHOT1Q8IXI2 618 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 SRRM1Q8IYB3 904 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ST13P4Q8IZP2 240 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ALG3Q92685 438 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ZNF653Q96CK0 615 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 GLT1D1Q96MS3 346 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 BTBD10Q9BSF8 475 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 NUP85Q9BW27 656 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 FRMD8Q9BZ67 464 aaPredicted RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 OSBPL8Q9BZF1 889 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 BHMT2Q9H2M3 363 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 ST6GALNAC4Q9H4F1 302 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 POLD4Q9HCU8 107 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 STARD7Q9NQZ5 370 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 AGPAT3Q9NRZ7 376 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 WDR35Q9P2L0 1181 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 STX18Q9P2W9 335 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 SHOC2Q9UQ13 582 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
CCDC33-209ENST00000560565 COMMD3-BMI1R4GMX3 469 aa8.98□□□□□ -0.97
CCDC33-209ENST00000560565 TRIP12Q14669 1992 aaPredicted RBP8.97□□□□□ -0.97
CCDC33-209ENST00000560565 IGKV6D-21A0A0A0MT36 114 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 A0A1W2PPC1 479 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 RBM47A0AV96 593 aaKnown RBP8.97□□□□□ -0.97
CCDC33-209ENST00000560565 DDX39AO00148 427 aaKnown RBP8.97□□□□□ -0.97
CCDC33-209ENST00000560565 BACH1O14867 736 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 NKRFO15226 690 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC33-209ENST00000560565 GYG2O15488 501 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 MAGEC1O60732 1142 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 PEX11AO75192 247 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 LRRN2O75325 713 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 CCNE2O96020 404 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 SUPT20HL2P0C7V6 817 aa8.97□□□□□ -0.97
CCDC33-209ENST00000560565 SLC26A2P50443 739 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms