RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 RIN3Q8TB24 985 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 OSCP1Q8WVF1 389 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 CYP2S1Q96SQ9 504 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 C2CD2Q9Y426 696 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 CEP192Q8TEP8 1941 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 FAM208BQ5VWN6 2430 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 CEP295Q9C0D2 2601 aa11.27□□□□□ -0.6
CDC42BPB-207ENST00000560492 ALDH1A2O94788 518 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 NFATC1O95644 943 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 KRT19P08727 400 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 CYP2F1P24903 491 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 POLR2BP30876 1174 aaKnown RBP11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 PNPLA4P41247 253 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 MCM6Q14566 821 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZNF268Q14587 947 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 PMS2CLQ68D20 193 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 DEFB124Q8NES8 71 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 SH3RF2Q8TEC5 729 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 SCNM1Q9BWG6 230 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 NUSAP1Q9BXS6 441 aaKnown RBP11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 EBF1Q9UH73 591 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
CDC42BPB-207ENST00000560492 IL18RAPO95256 599 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 TOP3BO95985 862 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ABL1P00519 1130 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ITGB3P05106 788 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ADRB2P07550 413 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 NUDT7P0C024 238 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 CEACAM1P13688 526 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 BCKDHBP21953 392 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ATXN3P54252 364 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 USP4Q13107 963 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZNF77Q15935 545 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 EML3Q32P44 896 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 PDCL2Q8N4E4 241 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZCCHC14Q8WYQ9 949 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 SLC22A12Q96S37 553 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 FAM213AQ9BRX8 229 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 SLC32A1Q9H598 525 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 GTF3C4Q9UKN8 822 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYOFQ9NZM1 2061 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 PI4KAP42356 2102 aa11.26□□□□□ -0.61
CDC42BPB-207ENST00000560492 PTPRDP23468 1912 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SOBPA7XYQ1 873 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 TADA3O75528 432 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 CFIP05156 583 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 HDCP19113 662 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 PLCG1P19174 1290 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 ANXA13P27216 316 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 PCSK1P29120 753 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 PDE6CP51160 858 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 IRX4P78413 519 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 GTF2BQ00403 316 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 POSTNQ15063 836 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 TRIM61Q5EBN2 209 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 LMBRD2Q68DH5 695 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 LPCAT2Q7L5N7 544 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 ADGRF2Q8IZF7 708 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SYCP3Q8IZU3 236 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 RLN3Q8WXF3 142 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 RAD54LQ92698 747 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 EZH1Q92800 747 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SAAL1Q96ER3 474 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 AK8Q96MA6 479 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 CCSER1Q9C0I3 900 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 L1RE1Q9UN81 338 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 SNX9Q9Y5X1 595 aa11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 ATXN2Q99700 1313 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 TNRC6BQ9UPQ9 1833 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-207ENST00000560492 BAHCC1Q9P281 2608 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYMKA6NI61 221 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 NOL4O94818 638 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 CLSTN1O94985 981 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 392 ms