RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LIMA1Q9UHB6 759 aaKnown RBP14.85□□□□□ -0.03
PKNOX1-209ENST00000560448 ATP2C2O75185 946 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 LRRN2O75325 713 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 NOL4O94818 638 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 PTMAP06454 111 aaKnown RBP14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 BDNFP23560 247 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 CYP2F1P24903 491 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 GRIK1P39086 918 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 SLC8A3P57103 927 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 KRT31Q15323 416 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 ARHGAP17Q68EM7 881 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 FAM35AQ86V20 835 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 TTC9BQ8N6N2 239 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 WHAMMQ8TF30 809 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 CORO1BQ9BR76 489 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 CSNK1G1Q9HCP0 422 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 DMAP1Q9NPF5 467 aaPredicted RBP14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 CDH7Q9ULB5 785 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 CNTN6Q9UQ52 1028 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 ZKSCAN5Q9Y2L8 839 aa14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 MRPS23Q9Y3D9 190 aaKnown RBP14.84□□□□□ -0.03
PKNOX1-209ENST00000560448 HCRTO43612 131 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 FAM200BP0CF97 657 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 PFKLP17858 780 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 PON1P27169 355 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 PRSS36Q5K4E3 855 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 DENND5BQ6ZUT9 1274 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 MTSS1LQ765P7 747 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 FUKQ8N0W3 1084 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 UBR7Q8N806 425 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 CYFIP2Q96F07 1278 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 RPGRIP1Q96KN7 1286 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 ARID3AQ99856 593 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 MED10Q9BTT4 135 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 B3GNT5Q9BYG0 378 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 PLCB1Q9NQ66 1216 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 IGSF9Q9P2J2 1179 aa14.83□□□□□ -0.03
PKNOX1-209ENST00000560448 LGALS16A8MUM7 142 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 PES1O00541 588 aaKnown RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 RTN3O95197 1032 aaPredicted RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 VDRP11473 427 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 LAMP2P13473 410 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 GBP2P32456 591 aaPredicted RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 SSTR3P32745 418 aaPredicted RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 PDE6CP51160 858 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 RAD23BP54727 409 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 LRMPQ12912 555 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 MEA1Q16626 185 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 ARHGAP15Q53QZ3 475 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 HSP90AA4PQ58FG1 418 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 PHLDB3Q6NSJ2 640 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 TMEM270Q6UE05 265 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 GET4Q7L5D6 327 aaPredicted RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 TMC8Q8IU68 726 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 SCN4BQ8IWT1 228 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC4A11Q8NBS3 891 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC2A14Q8TDB8 520 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 OVCA2Q8WZ82 227 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 FGF13Q92913 245 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 HEXIM2Q96MH2 286 aaKnown RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 LRRC3Q9BY71 257 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 UBXN6Q9BZV1 441 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF518BQ9C0D4 1074 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
PKNOX1-209ENST00000560448 NCANO14594 1321 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 F8VP50 259 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 TPM3P06753 285 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC9A1P19634 815 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 ACO1P21399 889 aaKnown RBP14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 WEE1P30291 646 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 COPB1P53618 953 aaKnown RBP14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 DDR2Q16832 855 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 FILIP1LQ4L180 1135 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 SGO2Q562F6 1265 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 NUP93Q8N1F7 819 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 SPC24Q8NBT2 197 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 PDZD8Q8NEN9 1154 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 E2F7Q96AV8 911 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 ELMO3Q96BJ8 720 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 TWNKQ96RR1 684 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 LPIN3Q9BQK8 851 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 TTLL2Q9BWV7 592 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 FBXO44Q9H4M3 255 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 KRT82Q9NSB4 513 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 HCFC1R1Q9NWW0 138 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 TAB2Q9NYJ8 693 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 TCF20Q9UGU0 1960 aaKnown RBP14.82□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC38A8A6NNN8 435 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 GOLGA6L6A8MZA4 724 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 C2CD4DB7Z1M9 353 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 AP1G2O75843 785 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 ATP1A3P13637 1013 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 HMGA1P17096 107 aaKnown RBP14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 NPR3P17342 541 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms