RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PKDCCQ504Y2 493 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 MDH1BQ5I0G3 518 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 FAM26DQ5JW98 314 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 B3GALNT2Q8NCR0 500 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 CFAP57Q96MR6 1250 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 FUT8Q9BYC5 575 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 PPP1R12CQ9BZL4 782 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SLC38A7Q9NVC3 462 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SAGE1Q9NXZ1 904 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 PHF24Q9UPV7 400 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 TDRD15B5MCY1 1934 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF623O75123 536 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM153BP0C7A2 387 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 CBX1P83916 185 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM153CQ494X1 144 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 UNC93AQ86WB7 457 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM126BQ8IXS8 530 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC35F5Q8WV83 523 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 RAPGEF5Q92565 580 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 MAGOHBQ96A72 148 aaKnown RBP11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 HAUS1Q96CS2 278 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 CHST7Q9NS84 486 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM153AQ9UHL3 310 aa11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 R3HDM2Q9Y2K5 976 aaKnown RBP11.46□□□□□ -0.58
SNRPA1-211ENST00000560433 MYBPHLA2RUH7 354 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 PAPSS1O43252 624 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 LRCH4O75427 683 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 ERLIN1O75477 346 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 DDHD2O94830 711 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CLLU1OSQ5K130 101 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 IPO4Q8TEX9 1081 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CALR3Q96L12 384 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 TMEM209Q96SK2 561 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 KCNK16Q96T55 309 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CRTAC1Q9NQ79 661 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 TTC7AQ9ULT0 858 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 KIAA0100Q14667 2235 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 SCN5AQ14524 2016 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 C9IYK1 514 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 DNM1LO00429 736 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CD48P09326 243 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 GABRB2P47870 512 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 NDUFV1P49821 464 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CDK7P50613 346 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 ATXN1P54253 815 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CACNA2D1P54289 1103 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 BCAR1P56945 870 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 ZNF268Q14587 947 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 SIX1Q15475 284 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 MFSD7Q6UXD7 560 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 PAQR9Q6ZVX9 377 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 PRUNE1Q86TP1 453 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 FUKQ8N0W3 1084 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 CRYBG2Q8N1P7 616 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 RXFP2Q8WXD0 754 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 MCRS1Q96EZ8 462 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 NEUROG2Q9H2A3 272 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 RGS18Q9NS28 235 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 TMEM30AQ9NV96 361 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 KIAA1257Q9ULG3 409 aa11.45□□□□□ -0.58
SNRPA1-211ENST00000560433 GOLGA6L10A0A0M3HER8 536 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC188H7C350 402 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 DAPK3O43293 454 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 KRT1P04264 644 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PDGFRAP16234 1089 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PBX3P40426 434 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 RAB27AP51159 221 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 MAP3K7CLP57077 242 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PPP1R2P3Q6NXS1 205 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC24A5Q71RS6 500 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 SND1Q7KZF4 910 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 TOP6BLQ8N6T0 577 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 ANKRD52Q8NB46 1076 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 HSPH1Q92598 858 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 SAE1Q9UBE0 346 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PRG3Q9Y2Y8 225 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 LRRD1A4D1F6 860 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 RPLP2P05387 115 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 SELPP16109 830 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms