RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
HERC1-206ENST00000559996 UBA3Q8TBC4 463 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 SLC2A14Q8TDB8 520 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 ATRIPQ8WXE1 791 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 TNIP3Q96KP6 325 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 KLHL5Q96PQ7 755 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 SMOQ99835 787 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 ZNF518BQ9C0D4 1074 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 ISCUQ9H1K1 167 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 CSNK1G1Q9HCP0 422 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 TSPAN16Q9UKR8 245 aa9.95□□□□□ -0.82
HERC1-206ENST00000559996 EPN1Q9Y6I3 576 aaPredicted RBP9.95□□□□□ -0.82
HERC1-206ENST00000559996 MYO7AQ13402 2215 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 MTMR11A4FU01 709 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 RCCD1A6NED2 376 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 GOLGA6L6A8MZA4 724 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CLSTN1O94985 981 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 SEC24AO95486 1093 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 ABL1P00519 1130 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CCDC172P0C7W6 258 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 GZMAP12544 262 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CD19P15391 556 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 TNFAIP3P21580 790 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 OR1D2P34982 312 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 PDE6CP51160 858 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 NOMO3P69849 1222 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 GFPT1Q06210 699 aaPredicted RBP9.94□□□□□ -0.82
HERC1-206ENST00000559996 GPM6BQ13491 265 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 RAB33AQ14088 237 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 SLC18A3Q16572 532 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CLEC16AQ2KHT3 1053 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 SLC39A12Q504Y0 691 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 ZNF280DQ6N043 979 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 PMF1Q6P1K2 205 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CLEC20AQ6ZU45 233 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 FMNL3Q8IVF7 1028 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CCDC170Q8IYT3 715 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 ANKRD52Q8NB46 1076 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 ATAD1Q8NBU5 361 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 ZNF461Q8TAF7 563 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 MYLPFQ96A32 169 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 TIFAQ96CG3 184 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 KCNK16Q96T55 309 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 C11orf84Q9BUA3 381 aaPredicted RBP9.94□□□□□ -0.82
HERC1-206ENST00000559996 DUSP16Q9BY84 665 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 OXCT2Q9BYC2 517 aaPredicted RBP9.94□□□□□ -0.82
HERC1-206ENST00000559996 TTYH1Q9H313 450 aaPredicted RBP9.94□□□□□ -0.82
HERC1-206ENST00000559996 SLC28A3Q9HAS3 691 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 MRPL17Q9NRX2 175 aaKnown RBP9.94□□□□□ -0.82
HERC1-206ENST00000559996 SPTLC3Q9NUV7 552 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 TJP2Q9UDY2 1190 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 STK39Q9UEW8 545 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 NAGPAQ9UK23 515 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 CDY1Q9Y6F8 540 aa9.94□□□□□ -0.82
HERC1-206ENST00000559996 TCRBV5S1A1TA0A578 114 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 EIF3CLB5ME19 914 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 NDUFA10O95299 355 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 BDNFP23560 247 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 CYP2F1P24903 491 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ANXA13P27216 316 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ADORA2BP29275 332 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 KIF11P52732 1056 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 CYP27A1Q02318 531 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 CENPCQ03188 943 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 PDE4CQ08493 712 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 KCNC3Q14003 757 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 STILQ15468 1287 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 GOLGA7BQ2TAP0 167 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 TDRD12Q587J7 1177 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 RAB41Q5JT25 222 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ACAD10Q6JQN1 1059 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 TOGARAM2Q6ZUX3 1019 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 TMC7Q7Z402 723 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ADGRD2Q7Z7M1 963 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 FAM35AQ86V20 835 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 DCP1BQ8IZD4 617 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 CPA5Q8WXQ8 436 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ARNTL2Q8WYA1 636 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 SECISBP2LQ93073 1101 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 EIF3CQ99613 913 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 TCF25Q9BQ70 676 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 SLC4A5Q9BY07 1137 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 PACSIN1Q9BY11 444 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 UBXN6Q9BZV1 441 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 TLR9Q9NR96 1032 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ZNHIT6Q9NWK9 470 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
HERC1-206ENST00000559996 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 TFR2Q9UP52 801 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
HERC1-206ENST00000559996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.93□□□□□ -0.82
HERC1-206ENST00000559996 CDH23Q9H251 3354 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 FAM170AA1A519 330 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms