RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 WDR72Q3MJ13 1102 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 KMT5BQ4FZB7 885 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 DCLK2Q8N568 766 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 RUBCNQ92622 972 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 FAM126AQ9BYI3 521 aaPredicted RBP20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 XYLT2Q9H1B5 865 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 KIF9Q9HAQ2 790 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 HPS4Q9NQG7 708 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 EXOC1Q9NV70 894 aa20.4■□□□□ 0.86
KNSTRN-208ENST00000559604 STAU1O95793 577 aaKnown RBP20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 FAM163BP0C2L3 166 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 BDNFP23560 247 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 GNL1P36915 607 aaPredicted RBP20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SATB1Q01826 763 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 CYP27A1Q02318 531 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 MAPRE1Q15691 268 aaKnown RBP20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 DGKKQ5KSL6 1271 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 TRIM68Q6AZZ1 485 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 VSTM1Q6UX27 236 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 Q6ZS52 159 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SPEM1Q8N4L4 309 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 GOLGA5Q8TBA6 731 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 MYCBPAPQ8TBZ2 947 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 PCED1BQ96HM7 432 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SPATA17Q96L03 361 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SPATA32Q96LK8 384 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SLC22A12Q96S37 553 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 CYP2S1Q96SQ9 504 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 EPC1Q9H2F5 836 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 SNX25Q9H3E2 840 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 DMAC2Q9NW81 257 aa20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 HELZP42694 1942 aaKnown RBP20.39■□□□□ 0.85
KNSTRN-208ENST00000559604 OTOL1A6NHN0 477 aaPredicted RBP20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 CXCL12P48061 93 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 TNNC1P63316 161 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 KRT85P78386 507 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 PSMD2Q13200 908 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 TRPC3Q13507 836 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 RUNX3Q13761 415 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 CCINQ13939 588 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 MDH1BQ5I0G3 518 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 KIAA2013Q8IYS2 634 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 OR6B3Q8NGW1 331 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 CHFRQ96EP1 664 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 HINFPQ9BQA5 517 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 KCTD10Q9H3F6 313 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 EBF3Q9H4W6 596 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 TRPC7Q9HCX4 862 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 USP25Q9UHP3 1055 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 GTF3C3Q9Y5Q9 886 aa20.38■□□□□ 0.85
KNSTRN-208ENST00000559604 CEP250Q9BV73 2442 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 LRRIQ3A6PVS8 624 aaPredicted RBP20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 ATICP31939 592 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 GRIK1P39086 918 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 USP46P62068 366 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 CLDN10P78369 228 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 PPP2R5DQ14738 602 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 TDRD10Q5VZ19 366 aaKnown RBP20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 SLC9A9Q8IVB4 645 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 TMEM174Q8WUU8 243 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 DPEP3Q9H4B8 488 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 C2orf42Q9NWW7 574 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 GCNT4Q9P109 453 aa20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 NXF1Q9UBU9 619 aaKnown RBP20.37■□□□□ 0.85
KNSTRN-208ENST00000559604 ATG2BQ96BY7 2078 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 TRAV19A0A0A6YYK7 116 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 FAM237AA0A1B0GTK4 181 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 C2orf78A6NCI8 922 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 MYL1P05976 194 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 CKMP06732 381 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 USP17L7P0C7H9 530 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 ARSAP15289 507 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 PTPN1P18031 435 aaKnown RBP20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 NRLP54845 237 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 FAM160A1Q05DH4 1040 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 ZNF77Q15935 545 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 DENND5BQ6ZUT9 1274 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 ARL14EPQ8N8R7 260 aaPredicted RBP20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 SYAP1Q96A49 352 aaPredicted RBP20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 CEP295NLQ96MC4 621 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 VRTNQ9H8Y1 702 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 TMEM30AQ9NV96 361 aa20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 SMG5Q9UPR3 1016 aaKnown RBP20.36■□□□□ 0.85
KNSTRN-208ENST00000559604 DNAH14Q0VDD8 3507 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 F8VP50 259 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 PDXKO00764 312 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 TRIM66O15016 1216 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 PHACTR2O75167 634 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 PAPSS2O95340 614 aaPredicted RBP20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 C4BPAP04003 597 aaKnown RBP20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 ANXA13P27216 316 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 SYKP43405 635 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 NDUFA8P51970 172 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 AP3M2P53677 418 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 CACNA2D1P54289 1103 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 DMWDQ09019 674 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 USP4Q13107 963 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 BIRC3Q13489 604 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 MTF1Q14872 753 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms