RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TTC13Q8NBP0 860 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 KLF6Q99612 283 aaPredicted RBP17.39■□□□□ 0.37
SPG11-215ENST00000559193 TBC1D10AQ9BXI6 508 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 DONSONQ9NYP3 566 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 KANSL3Q9P2N6 904 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 WDR91A4D1P6 747 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 C2CD2LO14523 706 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 PEX11AO75192 247 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 GM2AP17900 193 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 CCNG1P51959 295 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 RNASELQ05823 741 aaKnown RBP17.38■□□□□ 0.37
SPG11-215ENST00000559193 TAF1BQ53T94 588 aaPredicted RBP17.38■□□□□ 0.37
SPG11-215ENST00000559193 SLC45A4Q5BKX6 768 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 PRAMEF18Q5VWM3 479 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 EMC1Q8N766 993 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 BANPQ8N9N5 519 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 TCP10LQ8TDR4 215 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 RSAD2Q8WXG1 361 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 NRBP2Q9NSY0 501 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 SLC17A7Q9P2U7 560 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 GOLGA8RI6L899 631 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 RAP1GAPP47736 663 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 EFNA5P52803 228 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 PSMC1P62191 440 aaKnown RBP17.38■□□□□ 0.37
SPG11-215ENST00000559193 YWHAEP62258 255 aaKnown RBP17.38■□□□□ 0.37
SPG11-215ENST00000559193 BBS9Q3SYG4 887 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
SPG11-215ENST00000559193 MICALL2Q8IY33 904 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 FNIP1Q8TF40 1166 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
SPG11-215ENST00000559193 PRKCBP05771 671 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 CD19P15391 556 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 EPHB2P29323 1055 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 POLR2BP30876 1174 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 STAT5BP51692 787 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 NRLP54845 237 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 TAF5Q15542 800 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 HADHQ16836 314 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 FYB2Q5VWT5 728 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 BZW1Q7L1Q6 419 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 LONP2Q86WA8 852 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 CPXM1Q96SM3 734 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 RNPEPL1Q9HAU8 725 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 METTL5Q9NRN9 209 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 XPO7Q9UIA9 1087 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 ZFP69BQ9UJL9 534 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 TRAFD1O14545 582 aaPredicted RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 OVGP1Q12889 678 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 CTC1Q2NKJ3 1217 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 XYLT1Q86Y38 959 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 FAM71DQ8N9W8 422 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 RFWD2Q8NHY2 731 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 LHX5Q9H2C1 402 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 NXF1Q9UBU9 619 aaKnown RBP17.37■□□□□ 0.37
SPG11-215ENST00000559193 AFG3L2Q9Y4W6 797 aa17.37■□□□□ 0.37
SPG11-215ENST00000559193 C19orf81C9J6K1 198 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 TM9SF1O15321 606 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 PEX10O60683 326 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 ERBB2P04626 1255 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 GNAZP19086 355 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 MTDHQ86UE4 582 aaKnown RBP17.36■□□□□ 0.37
SPG11-215ENST00000559193 RFX6Q8HWS3 928 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 IGDCC3Q8IVU1 814 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 PALM2Q8IXS6 379 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 ZNF398Q8TD17 642 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 PTPRN2Q92932 1015 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 PCSK1NQ9UHG2 260 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 APOC4-APOC2K7ER74 178 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 KIF1CO43896 1103 aaKnown RBP17.36■□□□□ 0.37
SPG11-215ENST00000559193 APOC2P02655 101 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 EIF3EP60228 445 aaKnown RBP17.36■□□□□ 0.37
SPG11-215ENST00000559193 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 ORC1Q13415 861 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 CLNKQ7Z7G1 428 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 PDIK1LQ8N165 341 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
SPG11-215ENST00000559193 TCF7P36402 384 aaPredicted RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 BASP1P80723 227 aaKnown RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 SURF1Q15526 300 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 SEPT7Q16181 437 aaKnown RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 FAM160B1Q5W0V3 765 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 TMEM130Q8N3G9 435 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 CEP120Q8N960 986 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 BATF3Q9NR55 127 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPG11-215ENST00000559193 CALB2P22676 271 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms