RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
TRPM1-210ENST00000559179 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
TRPM1-210ENST00000559179 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
TRPM1-210ENST00000559179 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
TRPM1-210ENST00000559179 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
TRPM1-210ENST00000559179 SDK1Q7Z5N4 2213 aa13.23□□□□□ -0.29
TRPM1-210ENST00000559179 BCLAF3A2AJT9 711 aaKnown RBP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 C2orf78A6NCI8 922 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 MYMKA6NI61 221 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 TM4SF5O14894 197 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 ALDH1A2O94788 518 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 CLSTN1O94985 981 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 TNNC2P02585 160 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 ZNF77Q15935 545 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 EML3Q32P44 896 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 PGBD3Q8N328 593 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 LRRC52Q8N7C0 313 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 C1orf127Q8N9H9 656 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 PIGKQ92643 395 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 SLC22A12Q96S37 553 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 MMS19Q96T76 1030 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 LINC00597Q9H2U6 94 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 TRPM5Q9NZQ8 1165 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRPM1-210ENST00000559179 SEL1LQ9UBV2 794 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 SPAG17Q6Q759 2223 aa13.22□□□□□ -0.29
TRPM1-210ENST00000559179 OBSL1O75147 1896 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 PDGFRBP09619 1106 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 ADSSP30520 456 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 PSMC1P62191 440 aaKnown RBP13.21□□□□□ -0.29
TRPM1-210ENST00000559179 SHC2P98077 582 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 KCNA1Q09470 495 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
TRPM1-210ENST00000559179 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 HS2ST1Q7LGA3 356 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 BRAPQ7Z569 592 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 TOP6BLQ8N6T0 577 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 MYRFLQ96LU7 910 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 TMEM9BQ9NQ34 198 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
TRPM1-210ENST00000559179 GIPC1O14908 333 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 HCRTO43612 131 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 ATP2C2O75185 946 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 TADA3O75528 432 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 PROS1P07225 676 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 GARTP22102 1010 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 BDNFP23560 247 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 USP4Q13107 963 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 LMBRD2Q68DH5 695 aaPredicted RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 FUBP3Q96I24 572 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 HPDLQ96IR7 371 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 FAM84AQ96KN4 292 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 SPACA7Q96KW9 195 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 MTMR12Q9C0I1 747 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 SNX25Q9H3E2 840 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 RALYQ9UKM9 306 aaKnown RBP13.2□□□□□ -0.3
TRPM1-210ENST00000559179 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
TRPM1-210ENST00000559179 LEFTY2O00292 366 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
TRPM1-210ENST00000559179 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
TRPM1-210ENST00000559179 APODP05090 189 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 TIE1P35590 1138 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 STAT6P42226 847 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 WNT7BP56706 349 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 ALCAMQ13740 583 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 SURF1Q15526 300 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 DENND5BQ6ZUT9 1274 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 GPD1LQ8N335 351 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms