RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 LRRC3BQ96PB8 259 aa18.78■□□□□ 0.6
SMAD3-210ENST00000559092 C8orf33Q9H7E9 229 aaPredicted RBP18.78■□□□□ 0.6
SMAD3-210ENST00000559092 FAM86C1Q9NVL1 165 aa18.78■□□□□ 0.6
SMAD3-210ENST00000559092 PIAS3Q9Y6X2 628 aa18.78■□□□□ 0.6
SMAD3-210ENST00000559092 NCANO14594 1321 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 TRIM66O15016 1216 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 KRT13P13646 458 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 ANXA13P27216 316 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 PSMC2P35998 433 aaKnown RBP18.77■□□□□ 0.6
SMAD3-210ENST00000559092 GRIK1P39086 918 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 PNOCQ13519 176 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
SMAD3-210ENST00000559092 MDH1BQ5I0G3 518 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 C1orf220Q5T0J3 134 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 TXNDC8Q6A555 127 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 ZNF687Q8N1G0 1237 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 MAB21L3Q8N8X9 362 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 B3GALNT2Q8NCR0 500 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 TNIP3Q96KP6 325 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 ELOVL4Q9GZR5 314 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 KIF9Q9HAQ2 790 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 TDP1Q9NUW8 608 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 NME7Q9Y5B8 376 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 DMDP11532 3685 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 MYO15AQ9UKN7 3530 aa18.77■□□□□ 0.6
SMAD3-210ENST00000559092 LRRN2O75325 713 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 PFKLP17858 780 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 TARSP26639 723 aaKnown RBP18.76■□□□□ 0.59
SMAD3-210ENST00000559092 GTF2H1P32780 548 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 PPP3CCP48454 512 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 ZNF658Q5TYW1 1059 aaPredicted RBP18.76■□□□□ 0.59
SMAD3-210ENST00000559092 DENND5BQ6ZUT9 1274 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 GPIHBP1Q8IV16 184 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 FAM3CQ92520 227 aa18.76■□□□□ 0.59
SMAD3-210ENST00000559092 CIZ1Q9ULV3 898 aaPredicted RBP18.76■□□□□ 0.59
SMAD3-210ENST00000559092 ZFHX2Q9C0A1 2572 aaPredicted RBP18.75■□□□□ 0.59
SMAD3-210ENST00000559092 ASS1P00966 412 aaKnown RBP18.75■□□□□ 0.59
SMAD3-210ENST00000559092 CDH8P55286 799 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 NOP14P78316 857 aaKnown RBP18.75■□□□□ 0.59
SMAD3-210ENST00000559092 FZD5Q13467 585 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 MAMSTRQ6ZN01 415 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 USP13Q92995 863 aaPredicted RBP18.75■□□□□ 0.59
SMAD3-210ENST00000559092 IER2Q9BTL4 223 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 TTLL2Q9BWV7 592 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 SEMA4AQ9H3S1 761 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 DPEP3Q9H4B8 488 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 SMYD3Q9H7B4 428 aa18.75■□□□□ 0.59
SMAD3-210ENST00000559092 USP34Q70CQ2 3546 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 CETN3O15182 167 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 CLSTN1O94985 981 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 HLA-DRAP01903 254 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 PDE6CP51160 858 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 KPNA1P52294 538 aaPredicted RBP18.74■□□□□ 0.59
SMAD3-210ENST00000559092 ZNF528Q3MIS6 628 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 UNC93AQ86WB7 457 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 RALGPS2Q86X27 583 aaPredicted RBP18.74■□□□□ 0.59
SMAD3-210ENST00000559092 STKLD1Q8NE28 680 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 B3GNT5Q9BYG0 378 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 SMG9Q9H0W8 520 aaKnown RBP18.74■□□□□ 0.59
SMAD3-210ENST00000559092 SPATA6Q9NWH7 488 aaPredicted RBP18.74■□□□□ 0.59
SMAD3-210ENST00000559092 FBXO4Q9UKT5 387 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 PCDHA5Q9Y5H7 936 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 ATP8B3O60423 1300 aa18.74■□□□□ 0.59
SMAD3-210ENST00000559092 TRAV19A0A0A6YYK7 116 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 F8VP50 259 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 STX10O60499 249 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 TADA3O75528 432 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 USP17L7P0C7H9 530 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 PIK3CAP42336 1068 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 PRCPP42785 496 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 PPP3CAQ08209 521 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 SMYD4Q8IYR2 804 aaPredicted RBP18.73■□□□□ 0.59
SMAD3-210ENST00000559092 CRYBG2Q8N1P7 616 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 FAXDC2Q96IV6 333 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 TSG101Q99816 390 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 TMEM8AQ9HCN3 771 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 TRPM5Q9NZQ8 1165 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 CCL26Q9Y258 94 aa18.73■□□□□ 0.59
SMAD3-210ENST00000559092 LAMTOR5O43504 91 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 GFRA3O60609 400 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 SP9P0CG40 484 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 TRIM49P0CI25 452 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 TRIM49CP0CI26 452 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 TRIM21P19474 475 aaKnown RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 CCNE1P24864 410 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 GCLMP48507 274 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 FKBP3Q00688 224 aaKnown RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 ITPRIPL2Q3MIP1 535 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 CC2D1AQ6P1N0 951 aaPredicted RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 ZC3H14Q6PJT7 736 aaKnown RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 FRMD5Q7Z6J6 570 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 MAML2Q8IZL2 1156 aaPredicted RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 NKD2Q969F2 451 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms