RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 VSTM1Q6UX27 236 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 CCDC105Q8IYK2 499 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 DTWD2Q8NBA8 298 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 PJA1Q8NG27 643 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 CSGALNACT1Q8TDX6 532 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 TAS1R2Q8TE23 839 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 ATOH1Q92858 354 aaPredicted RBP16.31■□□□□ 0.2
RPL28-207ENST00000558815 DNASE1L2Q92874 299 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 ZFYVE19Q96K21 471 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
RPL28-207ENST00000558815 UXTQ9UBK9 157 aaPredicted RBP16.31■□□□□ 0.2
RPL28-207ENST00000558815 F8VP50 259 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 BIN1O00499 593 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 TADA3O75528 432 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 ASS1P00966 412 aaKnown RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 FAM163BP0C2L3 166 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 AVPR1AP37288 418 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 PMS1P54277 932 aaKnown RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 NOP14P78316 857 aaKnown RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 STIM1Q13586 685 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 ANKRD40Q6AI12 368 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 KLHL10Q6JEL2 608 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 TTC8Q8TAM2 541 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
RPL28-207ENST00000558815 NDRG2Q9UN36 371 aaKnown RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 MTF2Q9Y483 593 aaPredicted RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
RPL28-207ENST00000558815 MYH10P35580 1976 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 ANAPC1Q9H1A4 1944 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 TRIM66O15016 1216 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 NDST1P52848 882 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 NUBP1P53384 320 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 BPIFB1Q8TDL5 484 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 TAF4BQ92750 862 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 TRMT2BQ96GJ1 504 aaKnown RBP16.29■□□□□ 0.2
RPL28-207ENST00000558815 TNIP3Q96KP6 325 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 LRRC3BQ96PB8 259 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 ELOVL4Q9GZR5 314 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 LTB4R2Q9NPC1 389 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 HMGXB4Q9UGU5 601 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 CCL26Q9Y258 94 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 PIAS3Q9Y6X2 628 aa16.29■□□□□ 0.2
RPL28-207ENST00000558815 PSMA7O14818 248 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CHADO15335 359 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 ABL1P00519 1130 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CKMP06732 381 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CCDC130P13994 396 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 GLULP15104 373 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 CD58P19256 250 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.26e-34■□□□□ 11.2
RPL28-207ENST00000558815 TARSP26639 723 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 ASPAP45381 313 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 MXI1P50539 228 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 KPNA1P52294 538 aaPredicted RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 USP46P62068 366 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 COBLL1Q53SF7 1204 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 KRT39Q6A163 491 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 ZNF852Q6ZMS4 543 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 ALYREFQ86V81 257 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 MON1AQ86VX9 555 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CELF5Q8N6W0 485 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 MYRFLQ96LU7 910 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 DDX23Q9BUQ8 820 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 GTPBP4Q9BZE4 634 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
RPL28-207ENST00000558815 TMEM30AQ9NV96 361 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CTNND2Q9UQB3 1225 aa16.28■□□□□ 0.2
RPL28-207ENST00000558815 CCNE1P24864 410 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 SOX9P48436 509 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 LRRC63Q05C16 580 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 FCHO2Q0JRZ9 810 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 ANGPT1Q15389 498 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 ARHGAP29Q52LW3 1261 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 USP13Q92995 863 aaPredicted RBP16.27■□□□□ 0.2
RPL28-207ENST00000558815 C8orf48Q96LL4 319 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 SLC22A12Q96S37 553 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 NIF3L1Q9GZT8 377 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 FAM49BQ9NUQ9 324 aa16.27■□□□□ 0.2
RPL28-207ENST00000558815 TDP1Q9NUW8 608 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms