RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SMARCD1Q96GM5 515 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 GPR88Q9GZN0 384 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 NLRC4Q9NPP4 1024 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 TMEM30AQ9NV96 361 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 CEP72Q9P209 647 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 CNTN6Q9UQ52 1028 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 USP15Q9Y4E8 981 aaPredicted RBP18.52■□□□□ 0.55
TPM1-214ENST00000558544 TCF20Q9UGU0 1960 aaKnown RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 A0A1W2PQC6 194 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 GRXCR2A6NFK2 248 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 FOXN3O00409 490 aaPredicted RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 MBTPS2O43462 519 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 AP1G2O75843 785 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 PAPLNO95428 1278 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 BRD2P25440 801 aaKnown RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 EPHB3P54753 998 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 PLCB2Q00722 1185 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 SMAD4Q13485 552 aaKnown RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 VSTM1Q6UX27 236 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 ELMOD1Q8N336 334 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 HNRNPABQ99729 332 aaKnown RBP18.51■□□□□ 0.55
TPM1-214ENST00000558544 HCFC1R1Q9NWW0 138 aa18.51■□□□□ 0.55
TPM1-214ENST00000558544 F8VP50 259 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 F8VZ95 297 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 TRIM66O15016 1216 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 CBFA2T2O43439 604 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 POU2F2P09086 479 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 VDRP11473 427 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 ANXA13P27216 316 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 RPL10AP62906 217 aaKnown RBP18.5■□□□□ 0.55
TPM1-214ENST00000558544 GOLGA7BQ2TAP0 167 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 ARHGAP17Q68EM7 881 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 GRASPQ7Z6J2 395 aaPredicted RBP18.5■□□□□ 0.55
TPM1-214ENST00000558544 TFAP2BQ92481 460 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 STK33Q9BYT3 514 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 ACP6Q9NPH0 428 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 DAAM1Q9Y4D1 1078 aa18.5■□□□□ 0.55
TPM1-214ENST00000558544 ANAPC1Q9H1A4 1944 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 CYP26A1O43174 497 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 TPM3P06753 285 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 FAM200BP0CF97 657 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 GNA15P30679 374 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
TPM1-214ENST00000558544 PBX1P40424 430 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 JAM2P57087 298 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 NTHL1P78549 312 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 VEPH1Q14D04 833 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 ATAT1Q5SQI0 421 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 PTCRAQ6ISU1 281 aaPredicted RBP18.49■□□□□ 0.55
TPM1-214ENST00000558544 CLEC20AQ6ZU45 233 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 FAM71AQ8IYT1 594 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 SUSD6Q92537 303 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 ZNF512Q96ME7 567 aaPredicted RBP18.49■□□□□ 0.55
TPM1-214ENST00000558544 RIPOR3Q96MK2 946 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 SPAG5Q96R06 1193 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 SMOQ99835 787 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 ZSWIM1Q9BR11 485 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 CORO1BQ9BR76 489 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
TPM1-214ENST00000558544 DNMT3BQ9UBC3 853 aaKnown RBP18.49■□□□□ 0.55
TPM1-214ENST00000558544 TSPAN16Q9UKR8 245 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 KIAA1257Q9ULG3 409 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 DOCK8Q8NF50 2099 aa18.49■□□□□ 0.55
TPM1-214ENST00000558544 O00370 1275 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 AP5Z1O43299 807 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 BEST1O76090 585 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 MTHFRP42898 656 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 KCNQ1P51787 676 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 MTMR3Q13615 1198 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 GSE1Q14687 1217 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 CYP26C1Q6V0L0 522 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 ITIH5Q86UX2 942 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 GPIHBP1Q8IV16 184 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 HS6ST3Q8IZP7 471 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 PSMG2Q969U7 264 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 C8orf48Q96LL4 319 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 POMKQ9H5K3 350 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 ASB3Q9Y575 518 aa18.48■□□□□ 0.55
TPM1-214ENST00000558544 SLC38A8A6NNN8 435 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 THAP12O43422 761 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 IL9P15248 144 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 NPR3P17342 541 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 PTPN2P17706 415 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 CLCN1P35523 988 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 CBX2Q14781 532 aaPredicted RBP18.47■□□□□ 0.55
TPM1-214ENST00000558544 TAF12Q16514 161 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 PABPC1LQ4VXU2 614 aaKnown RBP18.47■□□□□ 0.55
TPM1-214ENST00000558544 SARM1Q6SZW1 724 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 DNAJB7Q7Z6W7 309 aaPredicted RBP18.47■□□□□ 0.55
TPM1-214ENST00000558544 SLC47A2Q86VL8 602 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 TTC30AQ86WT1 665 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 ZMIZ2Q8NF64 920 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 SPATA17Q96L03 361 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 DUSP16Q9BY84 665 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 CSNK1G1Q9HCP0 422 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms