RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 RLN3Q8WXF3 142 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 GTPBP2Q9BX10 602 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 ABCB6Q9NP58 842 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 TADA3O75528 432 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 CYP2F1P24903 491 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 P2RY2P41231 377 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 PNPLA4P41247 253 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 MYL7Q01449 175 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 ST3GAL1Q11201 340 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 IL17AQ16552 155 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 KCNN1Q92952 543 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 MYRFLQ96LU7 910 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 PNMA5Q96PV4 448 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 SLC22A12Q96S37 553 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 LINC00597Q9H2U6 94 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 ZHX3Q9H4I2 956 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 PARVGQ9HBI0 331 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 PTPRDP23468 1912 aa19.15■□□□□ 0.66
TSPAN3-204ENST00000558394 CACNA1EQ15878 2313 aa19.14■□□□□ 0.66
TSPAN3-204ENST00000558394 ANAPC1Q9H1A4 1944 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 TAF4O00268 1085 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 OPHN1O60890 802 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 HUS1O60921 280 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 KRT18P05783 430 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 OPRD1P41143 372 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 TOB1P50616 345 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 GFPT1Q06210 699 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SEMA3BQ13214 749 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SPDYCQ5MJ68 293 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 EOGTQ5NDL2 527 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SLFN12LQ6IEE8 588 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SLC23A3Q6PIS1 610 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SPATA2LQ8IUW3 424 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SCN4BQ8IWT1 228 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 TXNDC5Q8NBS9 432 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 CEP76Q8TAP6 659 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 ACBD6Q9BR61 282 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 DDX43Q9NXZ2 648 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 AGO2Q9UKV8 859 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 ARHGAP26Q9UNA1 814 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 LIMCH1Q9UPQ0 1083 aa19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 ATXN2Q99700 1313 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 TNRC6BQ9UPQ9 1833 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-204ENST00000558394 HELZP42694 1942 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 ADAMTS20P59510 1910 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 UPK3BL1B0FP48 263 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 UPK3BL2E5RIL1 263 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 TRAK2O60296 914 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 KLF8O95600 359 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 HOXD12P35452 270 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 PTGER3P43115 390 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 HNRNPDQ14103 355 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 DHX8Q14562 1220 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 DUOXA1Q1HG43 343 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 ZNF423Q2M1K9 1284 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 HSF5Q4G112 596 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 INTS6LQ5JSJ4 861 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 TMEM92Q6UXU6 159 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 PIP4P1Q86T03 277 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 PROSER1Q86XN7 944 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 ALLCQ8N6M5 410 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 FNBP1Q96RU3 617 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 REEP2Q9BRK0 252 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 TMEM74BQ9NUR3 256 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 SLC6A14Q9UN76 642 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 ADAMTS9Q9P2N4 1935 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 DMXL2Q8TDJ6 3036 aa19.13■□□□□ 0.65
TSPAN3-204ENST00000558394 C2orf78A6NCI8 922 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 APODP05090 189 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 TCF3P15923 654 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 ACAT1P24752 427 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 TIE1P35590 1138 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 ARSHQ5FYA8 562 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 RABEPKQ7Z6M1 372 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 NT5DC4Q86YG4 428 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 CHCHD4Q8N4Q1 142 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 HMGB4Q8WW32 186 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 PNKPQ96T60 521 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 GCNT4Q9P109 453 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 PILRBQ9UKJ0 227 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 GTF3C4Q9UKN8 822 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 CEP192Q8TEP8 1941 aa19.12■□□□□ 0.65
TSPAN3-204ENST00000558394 DSPP15924 2871 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 VWA3AA6NCI4 1184 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 AP5Z1O43299 807 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 TBCAO75347 108 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 IL18RAPO95256 599 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 POU5F1Q01860 360 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 CALML4Q96GE6 196 aa19.11■□□□□ 0.65
TSPAN3-204ENST00000558394 MBD1Q9UIS9 605 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms