RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 AFF4Q9UHB7 1163 aaKnown RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 INSL5Q9Y5Q6 135 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 NUMBLQ9Y6R0 609 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 USP34Q70CQ2 3546 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 A0A0U1RQJ8 604 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 PRRG1O14668 218 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 CLIC2O15247 247 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 KRT86O43790 486 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 AKAP3O75969 853 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 SASH3O75995 380 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 RHOP08100 348 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 EPB41P11171 864 aaKnown RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 ODC1P11926 461 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 TYMPP19971 482 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 PSMC2P35998 433 aaKnown RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 ENPEPQ07075 957 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 CCDC40Q4G0X9 1142 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 MIIPQ5JXC2 388 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 BEND6Q5SZJ8 279 aaPredicted RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 SCARA3Q6AZY7 606 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 OVOS1Q6IE37 1185 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 WDR59Q6PJI9 974 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 PARM1Q6UWI2 310 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 USP37Q86T82 979 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 TMEM105Q8N8V8 129 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 XXYLT1Q8NBI6 393 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 ING5Q8WYH8 240 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 NXPE3Q969Y0 559 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 BORCS6Q96GS4 357 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 EDEM3Q9BZQ6 932 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 CRISPLD1Q9H336 500 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 ACBD3Q9H3P7 528 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 DPP3Q9NY33 737 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 PSD3Q9NYI0 1048 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 HSPBP1Q9NZL4 362 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 FRMD4BQ9Y2L6 1034 aa10.99□□□□□ -0.65
TPM1-212ENST00000558347 ZFP37Q9Y6Q3 630 aaPredicted RBP10.99□□□□□ -0.65
TPM1-212ENST00000558347 TARSL2A2RTX5 802 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 EXOC3O60645 756 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 IL18RAPO95256 599 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 LDHAP00338 332 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 CFHP08603 1231 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 NPR3P17342 541 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 CEBPBP17676 345 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 PTPN2P17706 415 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 TRIM21P19474 475 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 OAS2P29728 719 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 CCR2P41597 374 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 CASP4P49662 377 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 CYP2J2P51589 502 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 NHLH1Q02575 133 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 TWF1Q12792 350 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 TCF15Q12870 199 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 VWA3BQ502W6 1294 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 PRSS36Q5K4E3 855 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 KIAA1328Q86T90 577 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 SIX5Q8N196 739 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 TXLNBQ8N3L3 684 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 RUBCNQ92622 972 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 JAKMIP2Q96AA8 810 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 TCEAL4Q96EI5 215 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 PGLYRP2Q96PD5 576 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 CORO1BQ9BR76 489 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 RBAKQ9NYW8 714 aaPredicted RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 CEP72Q9P209 647 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 FBXL21Q9UKT6 434 aa10.98□□□□□ -0.65
TPM1-212ENST00000558347 MRPS23Q9Y3D9 190 aaKnown RBP10.98□□□□□ -0.65
TPM1-212ENST00000558347 KRBA1A5PL33 1030 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 OR6C75A6NL08 312 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
TPM1-212ENST00000558347 CYB561D2O14569 222 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 EXTL3O43909 919 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 CYP11A1P05108 521 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 SRFP11831 508 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 TAF6P49848 677 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 TFAMQ00059 246 aaKnown RBP10.97□□□□□ -0.65
TPM1-212ENST00000558347 GPR17Q13304 367 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 CCDC122Q5T0U0 273 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 IQCEQ6IPM2 695 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 GPD1LQ8N335 351 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 C1orf127Q8N9H9 656 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 FLCNQ8NFG4 579 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 OR10T2Q8NGX3 314 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 GPR152Q8TDT2 470 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 MCRS1Q96EZ8 462 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 RTP3Q9BQQ7 232 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
TPM1-212ENST00000558347 EPC1Q9H2F5 836 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 MFSD1Q9H3U5 465 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms