RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 RPL10AP62906 217 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TNNC1P63316 161 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 BIRC3Q13489 604 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TAF12Q16514 161 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF699Q32M78 642 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ZACNQ401N2 412 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ARHGAP15Q53QZ3 475 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TPRG1Q6ZUI0 275 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 SMYD4Q8IYR2 804 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 OR6B3Q8NGW1 331 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 SPATA20Q8TB22 786 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 MYCBPAPQ8TBZ2 947 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 DNASE1L2Q92874 299 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 IRF7Q92985 503 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TRMT2BQ96GJ1 504 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 MYRFLQ96LU7 910 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 SNX25Q9H3E2 840 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 DPEP3Q9H4B8 488 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 LTB4R2Q9NPC1 389 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 TRPV5Q9NQA5 729 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 HEBP1Q9NRV9 189 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 FRMD4BQ9Y2L6 1034 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 CFAP54Q96N23 3096 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 FRYLO94915 3013 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ARHGAP33O14559 1287 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF263O14978 683 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 CHADO15335 359 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 TADA3O75528 432 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 PTPN1P18031 435 aaKnown RBP9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 BDNFP23560 247 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 RPL13P26373 211 aaKnown RBP9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 PRCPP42785 496 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 MRE11P49959 708 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 VAMP7P51809 220 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ENPEPQ07075 957 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 PPP3CAQ08209 521 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ADAM9Q13443 819 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 FZD5Q13467 585 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 MAPRE1Q15691 268 aaKnown RBP9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 SGSM1Q2NKQ1 1148 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 EDRF1Q3B7T1 1238 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF667Q5HYK9 610 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 VSTM1Q6UX27 236 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 SCN4BQ8IWT1 228 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ERCC4Q92889 916 aaPredicted RBP9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 CCDC34Q96HJ3 373 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 PCED1BQ96HM7 432 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 SPATA17Q96L03 361 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 GCNAQ96QF7 691 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 OSBPL6Q9BZF3 934 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 SDCBP2Q9H190 292 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 SMYD3Q9H7B4 428 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 OBP2AQ9NY56 170 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 ZMYM5Q9UJ78 669 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 PCDHA5Q9Y5H7 936 aa9.37□□□□□ -0.91
SNRPA1-206ENST00000558059 MYOFQ9NZM1 2061 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 PATJQ8NI35 1801 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 A8MXQ7 604 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 GADD45BO75293 160 aaPredicted RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ASS1P00966 412 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 HLA-DRAP01903 254 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 TRIM49P0CI25 452 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 TRIM49CP0CI26 452 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 TARSP26639 723 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 PSMC2P35998 433 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 RAP1GAPP47736 663 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 CACNA2D1P54289 1103 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 UBXN2BQ14CS0 331 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ANGPT1Q15389 498 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 COBLL1Q53SF7 1204 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF658Q5TYW1 1059 aaPredicted RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 TXNDC8Q6A555 127 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 SCARA5Q6ZMJ2 495 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF852Q6ZMS4 543 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 MON1AQ86VX9 555 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ELOA2Q8IYF1 753 aaPredicted RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM186BQ8IYM0 893 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms