RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RCCD1A6NED2 376 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 GRXCR1A8MXD5 290 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 CLDN5O00501 218 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 XPO1O14980 1071 aaKnown RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 AP1G2O75843 785 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 RB1P06400 928 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 ARHGAP25P42331 645 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 ACADSBP45954 432 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 IFI16Q16666 785 aaKnown RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 CCDC142Q17RM4 750 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 SLC8B1Q6J4K2 584 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 PRSS55Q6UWB4 352 aaPredicted RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 PAQR9Q6ZVX9 377 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 LRRTM3Q86VH5 581 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 DNAAF5Q86Y56 855 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 RHOT2Q8IXI1 618 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 FBXO22Q8NEZ5 403 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 C2orf15Q8WU43 125 aaKnown RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 SLC35F5Q8WV83 523 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 RFFLQ8WZ73 363 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 CALR3Q96L12 384 aaKnown RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 C11orf84Q9BUA3 381 aaPredicted RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 ABCB6Q9NP58 842 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 ST7Q9NRC1 585 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 TMLHEQ9NVH6 421 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 GUCA1BQ9UMX6 200 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 PCDHB5Q9Y5E4 795 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 A0A0U1RQJ8 604 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 FAM170AA1A519 330 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 C5orf67F2Z3F1 127 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 C2CD2LO14523 706 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 ZNF500O60304 480 aaPredicted RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 CA3P07451 260 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 OR4Q2P0C623 313 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 PLA2G4AP47712 749 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 RGS19P49795 217 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 ARPP19P56211 112 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 UBE3AQ05086 875 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 GPR17Q13304 367 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 RAB30Q15771 203 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 CFAP221Q4G0U5 840 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 PTPN20Q4JDL3 420 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 FAM109BQ6ICB4 259 aaPredicted RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 SPPL2BQ8TCT7 592 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 ATRIPQ8WXE1 791 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 C18orf8Q96DM3 657 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 HSFY1Q96LI6 401 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 TGS1Q96RS0 853 aaKnown RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 ZBP1Q9H171 429 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 DMAP1Q9NPF5 467 aaPredicted RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 AVENQ9NQS1 362 aaPredicted RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 ABI2Q9NYB9 513 aaPredicted RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 WDR35Q9P2L0 1181 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 CNOT8Q9UFF9 292 aaKnown RBP17.81■□□□□ 0.44
SNX1-203ENST00000558040 CYTH4Q9UIA0 394 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 TFR2Q9UP52 801 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 CDY1Q9Y6F8 540 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 SCINQ9Y6U3 715 aa17.81■□□□□ 0.44
SNX1-203ENST00000558040 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 MACROD2A1Z1Q3 448 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 KIF5CO60282 957 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 CYP1A2P05177 515 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 CTSAP10619 480 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 MYOGP15173 224 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 BDNFP23560 247 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 GABRB2P47870 512 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 NAP1L1P55209 391 aaKnown RBP17.8■□□□□ 0.44
SNX1-203ENST00000558040 PTP4A2Q12974 167 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 C17orf80Q9BSJ5 609 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 SLC4A5Q9BY07 1137 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 UBXN6Q9BZV1 441 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 CSNK1G1Q9HCP0 422 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 MRPL47Q9HD33 250 aaKnown RBP17.8■□□□□ 0.44
SNX1-203ENST00000558040 CTTNBP2NLQ9P2B4 639 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 UVRAGQ9P2Y5 699 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 MYO1AQ9UBC5 1043 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 TRIM10Q9UDY6 481 aa17.8■□□□□ 0.44
SNX1-203ENST00000558040 RRM1P23921 792 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 DNAJB2P25686 324 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 OR1D2P34982 312 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 MAGEA11P43364 429 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 NOP2P46087 812 aaKnown RBP17.79■□□□□ 0.44
SNX1-203ENST00000558040 RGS7P49802 495 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 GSCP56915 257 aaPredicted RBP17.79■□□□□ 0.44
SNX1-203ENST00000558040 MAP3K7CLP57077 242 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 ZNF268Q14587 947 aaPredicted RBP17.79■□□□□ 0.44
SNX1-203ENST00000558040 TCEAL1Q15170 157 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 PTPN14Q15678 1187 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 PMF1Q6P1K2 205 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 ZDHHC17Q8IUH5 632 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 TDHQ8IZJ6 230 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 SLC35G2Q8TBE7 412 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 KCTD13Q8WZ19 329 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 ARHGEF26Q96DR7 871 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms