RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PCSK9Q8NBP7 692 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 SLC4A11Q8NBS3 891 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 ZDHHC1Q8WTX9 485 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 UBXN4Q92575 508 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RABGGTAQ92696 567 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 ZNF653Q96CK0 615 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 HES6Q96HZ4 224 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 BTBD6Q96KE9 485 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 NUP85Q9BW27 656 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 TRIM6Q9C030 488 aaPredicted RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 ANKZF1Q9H8Y5 726 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CYP3A43Q9HB55 503 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 TRMT13Q9NUP7 481 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 CTTNBP2NLQ9P2B4 639 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CNOT8Q9UFF9 292 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 MKL2Q9ULH7 1088 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 PTCH2Q9Y6C5 1203 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 SERTM1A2A2V5 107 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 DCDC2BA2VCK2 349 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PIRO00625 290 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PTGESO14684 152 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 MGEA5O60502 916 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PAEPP09466 180 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 GHRP10912 638 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 CYP3A5P20815 502 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 RRM1P23921 792 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 IGFBP6P24592 240 aaPredicted RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 GRK4P32298 578 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 CDH5P33151 784 aaPredicted RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 YARSP54577 528 aaKnown RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 YWHAEP62258 255 aaKnown RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 CKAP4Q07065 602 aaKnown RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 C2orf54Q08AI8 447 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 INCA1Q0VD86 236 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PTK7Q13308 1070 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 DSC3Q14574 896 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 LPIN1Q14693 890 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 FBXO47Q5MNV8 452 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 DCAF12L1Q5VU92 463 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 C9orf57Q5W0N0 161 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 TWF2Q6IBS0 349 aaKnown RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 C11orf63Q6NUN7 778 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 FBXO38Q6PIJ6 1188 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 MMS22LQ6ZRQ5 1243 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PEX26Q7Z412 305 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 RSPH3Q86UC2 560 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PHF13Q86YI8 300 aaPredicted RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 SYCE1Q8N0S2 351 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 SLC43A3Q8NBI5 491 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 BEST2Q8NFU1 509 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 ZNF564Q8TBZ8 553 aaPredicted RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 KRT35Q92764 455 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PNKPQ96T60 521 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 MRPL45Q9BRJ2 306 aaKnown RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 TRIM7Q9C029 511 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 SAGE1Q9NXZ1 904 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 UVRAGQ9P2Y5 699 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 PARP2Q9UGN5 583 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 AMFRQ9UKV5 643 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 ZNF232Q9UNY5 417 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 GPC6Q9Y625 555 aaPredicted RBP7.83□□□□□ -1.16
SPG11-204ENST00000557866 ALG6Q9Y672 507 aa7.83□□□□□ -1.16
SPG11-204ENST00000557866 THSD7BQ9C0I4 1608 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 A0A1W2PQ45 241 aaPredicted RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 A0A1W2PQY0 241 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 TCRBV5S1A1TA0A578 114 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 TMEM110-MUSTN1A8MSY1 372 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 M0QZ92 97 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CES2O00748 559 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 KCNK3O14649 394 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CABYRO75952 493 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MICAL2O94851 1124 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 GJB6O95452 261 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 RPLP2P05387 115 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 MYBL1P10243 752 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 P4HA1P13674 534 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 COMTP21964 271 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MMP8P22894 467 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 AMPD1P23109 780 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CD52P31358 61 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 NSFP46459 744 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 AFF1P51825 1210 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 NDST1P52848 882 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 RNASE9P60153 205 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 PTPN11Q06124 597 aaPredicted RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 MAMLD1Q13495 774 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MESDQ14696 234 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 ZNF618Q5T7W0 954 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 PLEKHA7Q6IQ23 1121 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 LIMS2Q7Z4I7 341 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MRPL10Q7Z7H8 261 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 MMGT1Q8N4V1 131 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 LRRC52Q8N7C0 313 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MSANTD4Q8NCY6 345 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 C1orf131Q8NDD1 294 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 GSTCDQ8NEC7 633 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms