RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 NUDT5Q9UKK9 219 aa6.23□□□□□ -1.41
HNRNPC-233ENST00000557768 ANKRD6Q9Y2G4 727 aa6.23□□□□□ -1.41
HNRNPC-233ENST00000557768 PCDHA2Q9Y5H9 948 aa6.23□□□□□ -1.41
HNRNPC-233ENST00000557768 SALL3Q9BXA9 1300 aa6.23□□□□□ -1.41
HNRNPC-233ENST00000557768 C5orf42Q9H799 3197 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ABHD14A-ACY1A0A1B0GW23 586 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 LINC01553A4QN01 128 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 B4DLN1 442 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 C22orf46C9J442 243 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 FAM47E-STBD1D6RA91 191 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 PI4K2BG5E9Z4 385 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CREB3O43889 395 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 GJB5O95377 273 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CXCL10P02778 98 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 SNHG28P0DPA3 235 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 HSPD1P10809 573 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CASTP20810 708 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 KCNA5P22460 613 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 RECQLP46063 649 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 MECP2P51608 486 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 AFF3P51826 1226 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 MRPL12P52815 198 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CDC37Q16543 378 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ARHGAP44Q17R89 818 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 VMACQ2NL98 169 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 INAVAQ3KP66 663 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 MCMDC2Q4G0Z9 681 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ZNF618Q5T7W0 954 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ANKRD45Q5TZF3 282 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.22□□□□□ -1.411e-8■□□□□ 9.2
HNRNPC-233ENST00000557768 MFSD6Q6ZSS7 791 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ZNF589Q86UQ0 364 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 FAM129CQ86XR2 697 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 TMEM151BQ8IW70 566 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 NETO2Q8NC67 525 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CLRN3Q8NCR9 226 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 SLC5A5Q92911 643 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 EVI5LQ96CN4 794 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 FAXDC2Q96IV6 333 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 CHAMP1Q96JM3 812 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 PWWP2AQ96N64 755 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 TGS1Q96RS0 853 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 RMDN3Q96TC7 470 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 RAD9AQ99638 391 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 C17orf80Q9BSJ5 609 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 SLC13A1Q9BZW2 595 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 UBE2ZQ9H832 354 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 VAT1LQ9HCJ6 419 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 HELLSQ9NRZ9 838 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 C14orf119Q9NWQ9 140 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 H2AFY2Q9P0M6 372 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 PNMA2Q9UL42 364 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 ABCB11O95342 1321 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 NEDD4P46934 1319 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 PLXNA4Q9HCM2 1894 aa6.22□□□□□ -1.41
HNRNPC-233ENST00000557768 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 DHX16O60231 1041 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 KRT37O76014 449 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 CFBP00751 764 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 ASGR2P07307 311 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 IL9P15248 144 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 BCL6P41182 706 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 MC3RP41968 323 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 PDE1AP54750 535 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 STXBP2Q15833 593 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 CRY1Q16526 586 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 DGKDQ16760 1214 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 KIAA0753Q2KHM9 967 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 QRICH1Q2TAL8 776 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 MINDY4Q4G0A6 757 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 GPATCH4Q5T3I0 446 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 ARHGEF16Q5VV41 709 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 CEP68Q76N32 757 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 ADGRF4Q8IZF3 695 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 CPA6Q8N4T0 437 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 DACT3Q96B18 629 aaPredicted RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 TTC14Q96N46 770 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 UIMC1Q96RL1 719 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 IWS1Q96ST2 819 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 OXSMQ9NWU1 459 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 MKS1Q9NXB0 559 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 PNMA8BQ9ULN7 279 aaPredicted RBP6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 MRFAP1Q9Y605 127 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 CCDC171Q6TFL3 1326 aa6.21□□□□□ -1.42
HNRNPC-233ENST00000557768 ZNF318Q5VUA4 2279 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 H3BQ06 376 aaPredicted RBP6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 HAS3O00219 553 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 WNT9AO14904 365 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 AMHP03971 560 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 PCP11498 1178 aaKnown RBP6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 MYCLP12524 364 aaPredicted RBP6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 NCAM1P13591 858 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 ATF2P15336 505 aa6.2□□□□□ -1.42
HNRNPC-233ENST00000557768 BMP7P18075 431 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms