RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CLUL1Q15846 466 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 CNGA2Q16280 664 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 TMEM270Q6UE05 265 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-234ENST00000557703 GRASPQ7Z6J2 395 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-234ENST00000557703 FAM35AQ86V20 835 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 ZDHHC14Q8IZN3 488 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 FUKQ8N0W3 1084 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 ANKRD52Q8NB46 1076 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 SHC3Q92529 594 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 GCNAQ96QF7 691 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 ARID3AQ99856 593 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 MED10Q9BTT4 135 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 TTLL2Q9BWV7 592 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 STK33Q9BYT3 514 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 CRISPLD1Q9H336 500 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 DPEP3Q9H4B8 488 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 FBXO44Q9H4M3 255 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
SHMT2-234ENST00000557703 DNMT3BQ9UBC3 853 aaKnown RBP14.52□□□□□ -0.09
SHMT2-234ENST00000557703 HESX1Q9UBX0 185 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 NME7Q9Y5B8 376 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 PCDHB4Q9Y5E5 795 aa14.52□□□□□ -0.09
SHMT2-234ENST00000557703 A0A1B0GTH6 734 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 LOC730098B7Z3J9 87 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 MED7O43513 233 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 NOL4O94818 638 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 SERPINC1P01008 464 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 ATF6P18850 670 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 PDE6CP51160 858 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 KCNQ1P51787 676 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF132P52740 706 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 KCNMA1Q12791 1236 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 DENND5BQ6ZUT9 1274 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 PAQR9Q6ZVX9 377 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 RRAGAQ7L523 313 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 SLC2A14Q8TDB8 520 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 KREMEN1Q96MU8 473 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 DUSP16Q9BY84 665 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 EDEM3Q9BZQ6 932 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 POMKQ9H5K3 350 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 SIX2Q9NPC8 291 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHMT2-234ENST00000557703 IL37Q9NZH6 218 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 EPS15L1Q9UBC2 864 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 CDH7Q9ULB5 785 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 MYO6Q9UM54 1294 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 MRPS23Q9Y3D9 190 aaKnown RBP14.51□□□□□ -0.09
SHMT2-234ENST00000557703 PTPRDP23468 1912 aa14.51□□□□□ -0.09
SHMT2-234ENST00000557703 NCANO14594 1321 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 HCRTO43612 131 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 AP1G2O75843 785 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 CCDC172P0C7W6 258 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 SETSIPP0DME0 302 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 ATP1A3P13637 1013 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 NPR3P17342 541 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 BCAT1P54687 386 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 PTK2Q05397 1052 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 ZP2Q05996 745 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 ARHGAP15Q53QZ3 475 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 LCLAT1Q6UWP7 414 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 LUZP1Q86V48 1076 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 ARHGEF19Q8IW93 802 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 SCN4BQ8IWT1 228 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 NUP93Q8N1F7 819 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 C12orf29Q8N999 325 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 TDRD5Q8NAT2 981 aaKnown RBP14.5□□□□□ -0.09
SHMT2-234ENST00000557703 RBBP8NLQ8NC74 664 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-234ENST00000557703 PDZD8Q8NEN9 1154 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 NEK11Q8NG66 645 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 E2F7Q96AV8 911 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 TWNKQ96RR1 684 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 CORO1BQ9BR76 489 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 NAA15Q9BXJ9 866 aaKnown RBP14.5□□□□□ -0.09
SHMT2-234ENST00000557703 LRRC3Q9BY71 257 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF518BQ9C0D4 1074 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 HMGXB4Q9UGU5 601 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 SIK3Q9Y2K2 1263 aa14.5□□□□□ -0.09
SHMT2-234ENST00000557703 FAM92AA1XBS5 289 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 F8VP50 259 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 IL9P15248 144 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 HMGA1P17096 107 aaKnown RBP14.49□□□□□ -0.09
SHMT2-234ENST00000557703 NR1I3Q14994 352 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 DDR2Q16832 855 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF394Q53GI3 561 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 PRSS36Q5K4E3 855 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 PPP1R26Q5T8A7 1209 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-234ENST00000557703 DPY19L2P1Q6NXN4 242 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 MTSS1LQ765P7 747 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 TMC8Q8IU68 726 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 FAM71AQ8IYT1 594 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 TTC9BQ8N6N2 239 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 ELMO3Q96BJ8 720 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 SLITRK1Q96PX8 696 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 NUP58Q9BVL2 599 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 APOL5Q9BWW9 433 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms