RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TTC30AQ86WT1 665 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 ANKRD52Q8NB46 1076 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 CRTAC1Q9NQ79 661 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 CTTNBP2NLQ9P2B4 639 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 FAM170AA1A519 330 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 ATP2C2O75185 946 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 TKTP29401 623 aaKnown RBP25.09■■□□□ 1.61
SIX4-203ENST00000556952 CASQ1P31415 396 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 PLCB3Q01970 1234 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 BST2Q10589 180 aaKnown RBP25.09■■□□□ 1.61
SIX4-203ENST00000556952 PDCLQ13371 301 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 MDH1BQ5I0G3 518 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 INTS6LQ5JSJ4 861 aaKnown RBP25.09■■□□□ 1.61
SIX4-203ENST00000556952 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.09■■□□□ 1.61
SIX4-203ENST00000556952 UBA3Q8TBC4 463 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 MYCBPAPQ8TBZ2 947 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 SLC2A14Q8TDB8 520 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 CLP1Q92989 425 aaKnown RBP25.09■■□□□ 1.61
SIX4-203ENST00000556952 GUCD1Q96NT3 240 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 MIS12Q9H081 205 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 MTMR10Q9NXD2 777 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 CYTH4Q9UIA0 394 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 SCINQ9Y6U3 715 aa25.09■■□□□ 1.61
SIX4-203ENST00000556952 PLXNA4Q9HCM2 1894 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 RFXAPO00287 272 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 ATMINO43313 823 aaPredicted RBP25.08■■□□□ 1.61
SIX4-203ENST00000556952 LAG3P18627 525 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 RRM1P23921 792 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 GSCP56915 257 aaPredicted RBP25.08■■□□□ 1.61
SIX4-203ENST00000556952 TSPY1Q01534 308 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 MAPRE1Q15691 268 aaKnown RBP25.08■■□□□ 1.61
SIX4-203ENST00000556952 PTPN20Q4JDL3 420 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 TPCN2Q8NHX9 752 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 STK32AQ8WU08 396 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 ZNF592Q92610 1267 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 LPIN3Q9BQK8 851 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 MRPL47Q9HD33 250 aaKnown RBP25.08■■□□□ 1.61
SIX4-203ENST00000556952 OSGEPQ9NPF4 335 aa25.08■■□□□ 1.61
SIX4-203ENST00000556952 PTPRDP23468 1912 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 ATG2AQ2TAZ0 1938 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 FGFR3P22607 806 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 ADORA2BP29275 332 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 SLC8A3P57103 927 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 SPOUT1Q5T280 376 aaKnown RBP25.07■■□□□ 1.6
SIX4-203ENST00000556952 FAM171A1Q5VUB5 890 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 FAM171BQ6P995 826 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 FUKQ8N0W3 1084 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 IPO4Q8TEX9 1081 aaKnown RBP25.07■■□□□ 1.6
SIX4-203ENST00000556952 ZNF558Q96NG5 402 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 NUP85Q9BW27 656 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 GPR62Q9BZJ7 368 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 EYSQ5T1H1 3165 aa25.07■■□□□ 1.6
SIX4-203ENST00000556952 CTAGE9A4FU28 777 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 NT5C1B-RDH14C9J2C7 533 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 PBX3P40426 434 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 GABRB2P47870 512 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 SNX16P57768 344 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 VARS2Q5ST30 1063 aaKnown RBP25.06■■□□□ 1.6
SIX4-203ENST00000556952 PLEKHA7Q6IQ23 1121 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 KCNT2Q6UVM3 1135 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 SYCE1Q8N0S2 351 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 ZNF564Q8TBZ8 553 aaPredicted RBP25.06■■□□□ 1.6
SIX4-203ENST00000556952 SLC35F5Q8WV83 523 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 CPXM1Q96SM3 734 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 NAPGQ99747 312 aaPredicted RBP25.06■■□□□ 1.6
SIX4-203ENST00000556952 SYNCQ9H7C4 482 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 CYLDQ9NQC7 956 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 PARVAQ9NVD7 372 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 WDR35Q9P2L0 1181 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 COG5Q9UP83 839 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 JRKLQ9Y4A0 524 aa25.06■■□□□ 1.6
SIX4-203ENST00000556952 MYBPHLA2RUH7 354 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 GRID2IPA4D2P6 1211 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 FANCGO15287 622 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 PALMO75781 387 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 CTNNB1P35222 781 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 PDE4CQ08493 712 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 TMEM173Q86WV6 379 aaPredicted RBP25.05■■□□□ 1.6
SIX4-203ENST00000556952 OR10T2Q8NGX3 314 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 C18orf8Q96DM3 657 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 PCED1BQ96HM7 432 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 IGSF21Q96ID5 467 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 PKMYT1Q99640 499 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 MED10Q9BTT4 135 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 OXCT2Q9BYC2 517 aaPredicted RBP25.05■■□□□ 1.6
SIX4-203ENST00000556952 B3GNT5Q9BYG0 378 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 REV3LO60673 3130 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 EFEMP2O95967 443 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 MRPL58Q14197 206 aaKnown RBP25.05■■□□□ 1.6
SIX4-203ENST00000556952 C2CD6Q53TS8 623 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 ZNF280DQ6N043 979 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 LRRC57Q8N9N7 239 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 C3orf20Q8ND61 904 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 GDPD5Q8WTR4 605 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 BCL7CQ8WUZ0 217 aaPredicted RBP25.05■■□□□ 1.6
SIX4-203ENST00000556952 CDX2Q99626 313 aaPredicted RBP25.05■■□□□ 1.6
SIX4-203ENST00000556952 DUSP16Q9BY84 665 aa25.05■■□□□ 1.6
SIX4-203ENST00000556952 XPO1O14980 1071 aaKnown RBP25.04■■□□□ 1.6
SIX4-203ENST00000556952 FAM200BP0CF97 657 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms