RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 FGFR1OPO95684 399 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 GNA14O95837 355 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 AFPP02771 609 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 C4BPAP04003 597 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 KRT13P13646 458 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 ZSCAN20P17040 1043 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 SLC9A1P19634 815 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 AXLP30530 894 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PBX1P40424 430 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 FMO5P49326 533 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 WDR5P61964 334 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 UBXN1Q04323 297 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 HYAL2Q12891 473 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 LRMPQ12912 555 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PSMD6Q15008 389 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 SYCP1Q15431 976 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PLEKHG4Q58EX7 1191 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 DPY19L2P1Q6NXN4 242 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 DNAJC14Q6Y2X3 702 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 SPRED2Q7Z698 418 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 FAM114A1Q8IWE2 563 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TAS1R2Q8TE23 839 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 GDPD5Q8WTR4 605 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TMEM174Q8WUU8 243 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 RABGGTAQ92696 567 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 SEMA4DQ92854 862 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PMEPA1Q969W9 287 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 C18orf25Q96B23 403 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 ACAP3Q96P50 834 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 CGRRF1Q99675 332 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PI4K2AQ9BTU6 479 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 LSM14BQ9BX40 385 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 IFIH1Q9BYX4 1025 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 NDST4Q9H3R1 872 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 RPF1Q9H9Y2 349 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 METTL14Q9HCE5 456 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 FAM105AQ9NUU6 356 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TUBGCP4Q9UGJ1 667 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PLAGL2Q9UPG8 496 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 TCF20Q9UGU0 1960 aaKnown RBP5.72□□□□□ -1.49
ATXN3-244ENST00000556898 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
ATXN3-244ENST00000556898 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.49
ATXN3-244ENST00000556898 SCN5AQ14524 2016 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 KAT6AQ92794 2004 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 TTC26A0AVF1 554 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 PRR19A6NJB7 356 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 C9IYK1 514 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 PTGESO14684 152 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 MAPK13O15264 365 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 DDX3YO15523 660 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 PAX4O43316 350 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 NCK2O43639 380 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 B4GALT3O60512 393 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 VNN1O95497 513 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 LDHAP00338 332 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CST3P01034 146 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 POMCP01189 267 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CALCAP01258 141 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CXCL10P02778 98 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 RPLP2P05387 115 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CLTAP09496 248 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 PNMA6AP0CW24 399 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 FGFR1P11362 822 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ITGA4P13612 1032 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 TNNI1P19237 187 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SCP2P22307 547 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CES1P23141 567 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CDC25BP30305 580 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ABCD1P33897 745 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 MLH1P40692 756 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SCNN1GP51170 649 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 IRAK1P51617 712 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 GP2P55259 537 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 DEFB103AP81534 67 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 TFAMQ00059 246 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 MYL7Q01449 175 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ZP2Q05996 745 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SOX4Q06945 474 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 NCBP1Q09161 790 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 IKBKEQ14164 716 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 DCAF4L1Q3SXM0 396 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 FILIP1LQ4L180 1135 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 EPC2Q52LR7 807 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 TDRD10Q5VZ19 366 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SPOPLQ6IQ16 392 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 FAM117BQ6P1L5 589 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ALKAL1Q6UXT8 129 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 AGMOQ6ZNB7 445 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 C15orf39Q6ZRI6 1047 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 INTS8Q75QN2 995 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 BMP8AQ7Z5Y6 402 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms