RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TMEM150AQ86TG1 271 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 FAM35AQ86V20 835 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 TTC39CQ8N584 583 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 ZSCAN18Q8TBC5 510 aaPredicted RBP24.32■■□□□ 1.48
TDP1-216ENST00000556867 ELSPBP1Q96BH3 223 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 C8orf48Q96LL4 319 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 FAM124BQ9H5Z6 455 aaPredicted RBP24.32■■□□□ 1.48
TDP1-216ENST00000556867 SLC2A4RGQ9NR83 387 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 DACH1Q9UI36 760 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 ZDBF2Q9HCK1 2354 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 CLDN5O00501 218 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 P4HA2O15460 535 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 F11P03951 625 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 TRIM21P19474 475 aaKnown RBP24.31■■□□□ 1.48
TDP1-216ENST00000556867 ANXA13P27216 316 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 STXBP5Q5T5C0 1151 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 GPR158Q5T848 1215 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 TANGO2Q6ICL3 276 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 TWNKQ96RR1 684 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 NT5C1AQ9BXI3 368 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 ZFP14Q9HCL3 533 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 TMEM30AQ9NV96 361 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 ZMYM5Q9UJ78 669 aa24.31■■□□□ 1.48
TDP1-216ENST00000556867 MAGED2Q9UNF1 606 aaPredicted RBP24.31■■□□□ 1.48
TDP1-216ENST00000556867 ZNF638Q14966 1978 aaKnown RBP24.31■■□□□ 1.48
TDP1-216ENST00000556867 F8VP50 259 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 CD58P19256 250 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 ERCC5P28715 1186 aaPredicted RBP24.3■■□□□ 1.48
TDP1-216ENST00000556867 CACNA2D1P54289 1103 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 CYP4F8P98187 520 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 ORC1Q13415 861 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 PAQR9Q6ZVX9 377 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 FUKQ8N0W3 1084 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 WHAMMQ8TF30 809 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 TATDN2Q93075 761 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 TASP1Q9H6P5 420 aa24.3■■□□□ 1.48
TDP1-216ENST00000556867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.3■■□□□ 1.48
TDP1-216ENST00000556867 MYH10P35580 1976 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 TADA3O75528 432 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 WEE1P30291 646 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 KCNH2Q12809 1159 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 DENND5BQ6ZUT9 1274 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 PBXIP1Q96AQ6 731 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 SMARCD1Q96GM5 515 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 CNOT6LQ96LI5 555 aaKnown RBP24.29■■□□□ 1.48
TDP1-216ENST00000556867 ARID3AQ99856 593 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 MED10Q9BTT4 135 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 TTLL2Q9BWV7 592 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 PLA2G2FQ9BZM2 168 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 CISHQ9NSE2 258 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 WNT16Q9UBV4 365 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 ANAPC1Q9H1A4 1944 aa24.29■■□□□ 1.48
TDP1-216ENST00000556867 ZNF318Q5VUA4 2279 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 SOBPA7XYQ1 873 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 AFPP02771 609 aaKnown RBP24.28■■□□□ 1.48
TDP1-216ENST00000556867 CCDC130P13994 396 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 DDX6P26196 483 aaKnown RBP eCLIP24.28■■□□□ 1.48
TDP1-216ENST00000556867 CETN1Q12798 172 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 CUL2Q13617 745 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 CT47A1Q5JQC4 288 aaPredicted RBP24.28■■□□□ 1.48
TDP1-216ENST00000556867 E2F7Q96AV8 911 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 DNAI2Q9GZS0 605 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 DMAP1Q9NPF5 467 aaPredicted RBP24.28■■□□□ 1.48
TDP1-216ENST00000556867 KRT82Q9NSB4 513 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 FAM49BQ9NUQ9 324 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 EHD2Q9NZN4 543 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 FBXL21Q9UKT6 434 aa24.28■■□□□ 1.48
TDP1-216ENST00000556867 PATJQ8NI35 1801 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 CFHP08603 1231 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 VIPR2P41587 438 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 GPC5P78333 572 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 IRF2BP1Q8IU81 584 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 ARID3BQ8IVW6 561 aaPredicted RBP24.27■■□□□ 1.48
TDP1-216ENST00000556867 C12orf29Q8N999 325 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 LMO3Q8TAP4 145 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 SLC2A14Q8TDB8 520 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 DEPDC1BQ8WUY9 529 aa24.27■■□□□ 1.48
TDP1-216ENST00000556867 MRPS31Q92665 395 aaKnown RBP24.27■■□□□ 1.48
TDP1-216ENST00000556867 AP1G2O75843 785 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 PDGFBP01127 241 aaPredicted RBP24.26■■□□□ 1.47
TDP1-216ENST00000556867 TBXAS1P24557 533 aaPredicted RBP24.26■■□□□ 1.47
TDP1-216ENST00000556867 USP46P62068 366 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 TPD52L1Q16890 204 aaPredicted RBP24.26■■□□□ 1.47
TDP1-216ENST00000556867 VITQ6UXI7 678 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 FBXL6Q8N531 539 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 NT5C1BQ96P26 610 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 HNRNPABQ99729 332 aaKnown RBP24.26■■□□□ 1.47
TDP1-216ENST00000556867 SLC46A2Q9BY10 475 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 THAP9Q9H5L6 903 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 NCANO14594 1321 aa24.26■■□□□ 1.47
TDP1-216ENST00000556867 YWHAEP62258 255 aaKnown RBP24.25■■□□□ 1.47
TDP1-216ENST00000556867 PFKPQ01813 784 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 LRMPQ12912 555 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 MON1AQ86VX9 555 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 RSPRY1Q96DX4 576 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 KCNK16Q96T55 309 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 CSNK1G1Q9HCP0 422 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 OBP2AQ9NY56 170 aa24.25■■□□□ 1.47
TDP1-216ENST00000556867 HEPACAM2A8MVW5 462 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 PRAMEF12O95522 483 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms