RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 TMOD3Q9NYL9 352 aa6.34□□□□□ -1.39
HIF1A-209ENST00000556827 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
HIF1A-209ENST00000556827 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
HIF1A-209ENST00000556827 POLHQ9Y253 713 aa6.34□□□□□ -1.39
HIF1A-209ENST00000556827 SBF2Q86WG5 1849 aa6.34□□□□□ -1.4
HIF1A-209ENST00000556827 INSRP06213 1382 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 FLT4P35916 1363 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 KIF24Q5T7B8 1368 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 PIPSLA2A3N6 862 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 CTNND1O60716 968 aaKnown RBP6.33□□□□□ -1.4
HIF1A-209ENST00000556827 FOSP01100 380 aaPredicted RBP6.33□□□□□ -1.4
HIF1A-209ENST00000556827 CFIP05156 583 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 ITGAMP11215 1152 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 PHKA1P46020 1223 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 HSP90AB2PQ58FF8 381 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 THEMIS2Q5TEJ8 643 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 MAPKAPK5Q8IW41 473 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 TTC8Q8TAM2 541 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 TBC1D15Q8TC07 691 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 ASB10Q8WXI3 467 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 RUNDC1Q96C34 613 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 TESK2Q96S53 571 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 SLAMF7Q9NQ25 335 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 LMBRD1Q9NUN5 540 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 KLHL11Q9NVR0 708 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 SYBUQ9NX95 663 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
HIF1A-209ENST00000556827 NOX1Q9Y5S8 564 aa6.33□□□□□ -1.4
HIF1A-209ENST00000556827 IGSF1Q8N6C5 1336 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 VSTM5A8MXK1 200 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 H3BUI4 141 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 SLC16A6O15403 523 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 UBXN7O94888 489 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 MTHFD1P11586 935 aaKnown RBP6.32□□□□□ -1.4
HIF1A-209ENST00000556827 SEC24CP53992 1094 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 NOMO3P69849 1222 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 ATP2B3Q16720 1220 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 NOMO2Q5JPE7 1267 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 UTP14CQ5TAP6 766 aaKnown RBP6.32□□□□□ -1.4
HIF1A-209ENST00000556827 OVCH2Q7RTZ1 564 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 DENND1CQ8IV53 801 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 SLC44A3Q8N4M1 653 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 IL17RDQ8NFM7 739 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 LINC00476Q8WZB0 136 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 RNF31Q96EP0 1072 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 ZSWIM1Q9BR11 485 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 PACSIN1Q9BY11 444 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 RNPEPQ9H4A4 650 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 GABBR1Q9UBS5 961 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 STAP2Q9UGK3 403 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 STXBP5LQ9Y2K9 1186 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 PCDHA1Q9Y5I3 950 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 EPN1Q9Y6I3 576 aaPredicted RBP6.32□□□□□ -1.4
HIF1A-209ENST00000556827 ATP10DQ9P241 1426 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 WNK3Q9BYP7 1800 aa6.32□□□□□ -1.4
HIF1A-209ENST00000556827 NSD2O96028 1365 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 MEGF6O75095 1541 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 AGFG2O95081 481 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 AHSGP02765 367 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
HIF1A-209ENST00000556827 ALAS1P13196 640 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 TYRP14679 529 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 HTR1BP28222 390 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PRDX5P30044 214 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PLS1Q14651 629 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 LLGL1Q15334 1064 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PPP1R3BQ86XI6 285 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 ADGRG3Q86Y34 549 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 FITM2Q8N6M3 262 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 CELF5Q8N6W0 485 aaKnown RBP6.31□□□□□ -1.4
HIF1A-209ENST00000556827 KLHDC4Q8TBB5 520 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PIGBQ92521 554 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
HIF1A-209ENST00000556827 NT5C1BQ96P26 610 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 ALOXE3Q9BYJ1 711 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PNPOQ9NVS9 261 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 PAPPAQ13219 1627 aa6.31□□□□□ -1.4
HIF1A-209ENST00000556827 MON2Q7Z3U7 1717 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 BTAF1O14981 1849 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 A0A1B0GTW7 788 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 A6NNZ2 444 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 H3BML4 177 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 MARCH6O60337 910 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 SLC43A1O75387 559 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 HAUS5O94927 633 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 MMP10P09238 476 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
HIF1A-209ENST00000556827 FDXRP22570 491 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 CXCR5P32302 372 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 RFC4P35249 363 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms