RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TIGD1Q96MW7 591 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 SNX25Q9H3E2 840 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 BRD9Q9H8M2 597 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 MAGEC2Q9UBF1 373 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 HMGXB4Q9UGU5 601 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 CCL26Q9Y258 94 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 FRMD4BQ9Y2L6 1034 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 FANCMQ8IYD8 2048 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 A8MXQ7 604 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CLDN5O00501 218 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 IKBKBO14920 756 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF263O14978 683 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CHADO15335 359 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ASS1P00966 412 aaKnown RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PTPN1P18031 435 aaKnown RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 GNL1P36915 607 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 NBL1P41271 181 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PIK3CAP42336 1068 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PRCPP42785 496 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PMS1P54277 932 aaKnown RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CDH8P55286 799 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 USP46P62068 366 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CYP27A1Q02318 531 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 UBXN2BQ14CS0 331 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 TAF12Q16514 161 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF658Q5TYW1 1059 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 TXNDC8Q6A555 127 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 SPOPLQ6IQ16 392 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 FAM35AQ86V20 835 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 MON1AQ86VX9 555 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 MAML2Q8IZL2 1156 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CMTM8Q8IZV2 173 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 TAS1R2Q8TE23 839 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 IRF7Q92985 503 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CLDN23Q96B33 292 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ZFYVE19Q96K21 471 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 C8orf48Q96LL4 319 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 CEP295NLQ96MC4 621 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 GSDMAQ96QA5 445 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 TTLL2Q9BWV7 592 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 B3GNT5Q9BYG0 378 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF518BQ9C0D4 1074 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 IRF2BPLQ9H1B7 796 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 APOBEC3GQ9HC16 384 aaKnown RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 RMND1Q9NWS8 449 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 UXTQ9UBK9 157 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PCDHA5Q9Y5H7 936 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 PIAS3Q9Y6X2 628 aa11.01□□□□□ -0.65
SHMT2-224ENST00000556737 KIAA1549LQ6ZVL6 1849 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 MYO16Q9Y6X6 1858 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 FAM170BA6NMN3 283 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 SOBPA7XYQ1 873 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 PROB1E7EW31 1015 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 F8VP50 259 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 PSMC2P35998 433 aaKnown RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 SOX9P48436 509 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 GCLMP48507 274 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 USP4Q13107 963 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF852Q6ZMS4 543 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 PAQR9Q6ZVX9 377 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 ELOA2Q8IYF1 753 aaPredicted RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 ADSSL1Q8N142 457 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 CELF5Q8N6W0 485 aaKnown RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 MAB21L3Q8N8X9 362 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 BPIFB1Q8TDL5 484 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 MRPS31Q92665 395 aaKnown RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 TAF4BQ92750 862 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
SHMT2-224ENST00000556737 EEF2KMTQ96G04 330 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 CCDC34Q96HJ3 373 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 SLC22A12Q96S37 553 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 BCO2Q9BYV7 579 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 ELOVL4Q9GZR5 314 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 KIF9Q9HAQ2 790 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 GCNT4Q9P109 453 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 ZMYM5Q9UJ78 669 aa11□□□□□ -0.65
SHMT2-224ENST00000556737 C2orf78A6NCI8 922 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 DPYSL4O14531 572 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TRIM66O15016 1216 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 SMC2O95347 1197 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 BMP6P22004 513 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 RPL13P26373 211 aaKnown RBP10.99□□□□□ -0.65
SHMT2-224ENST00000556737 GRIK1P39086 918 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 MAGEA9P43362 315 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
SHMT2-224ENST00000556737 MLLT6P55198 1093 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-224ENST00000556737 NOP14P78316 857 aaKnown RBP10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TNK2Q07912 1038 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 INCA1Q0VD86 236 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 ORC1Q13415 861 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 ADAM9Q13443 819 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms