RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TASP1Q9H6P5 420 aa12.28□□□□□ -0.44
SLIRP-206ENST00000556375 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
SLIRP-206ENST00000556375 APOBEC3GQ9HC16 384 aaKnown RBP12.28□□□□□ -0.44
SLIRP-206ENST00000556375 ARHGEF3Q9NR81 526 aa12.28□□□□□ -0.44
SLIRP-206ENST00000556375 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
SLIRP-206ENST00000556375 WDFY4Q6ZS81 3184 aa12.27□□□□□ -0.44
SLIRP-206ENST00000556375 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 F8VP50 259 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 TADA3O75528 432 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 F11P03951 625 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
SLIRP-206ENST00000556375 DDX6P26196 483 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLIRP-206ENST00000556375 WEE1P30291 646 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 GRIK1P39086 918 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 NDST1P52848 882 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CBWD6Q4V339 395 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CBWD3Q5JTY5 395 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CBWD5Q5RIA9 395 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CWF19L1Q69YN2 538 aaKnown RBP12.27□□□□□ -0.45
SLIRP-206ENST00000556375 VITQ6UXI7 678 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 FAM35AQ86V20 835 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 SEMA4DQ92854 862 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 C8orf48Q96LL4 319 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 PLA2G2FQ9BZM2 168 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-206ENST00000556375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.27□□□□□ -0.456e-11■■■■■ 34.8
SLIRP-206ENST00000556375 LMBRD1Q9NUN5 540 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 HMGXB4Q9UGU5 601 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 CA14Q9ULX7 337 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-206ENST00000556375 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 NCANO14594 1321 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 MYO16Q9Y6X6 1858 aa12.27□□□□□ -0.45
SLIRP-206ENST00000556375 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 LRRN2O75325 713 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 GNA14O95837 355 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 NPR3P17342 541 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 PSMC3P17980 439 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 VIPR2P41587 438 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 VCPP55072 806 aaKnown RBP12.26□□□□□ -0.45
SLIRP-206ENST00000556375 STX17P56962 302 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 GRM2Q14416 872 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 WDR44Q5JSH3 913 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-206ENST00000556375 DENND5BQ6ZUT9 1274 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 ARID3BQ8IVW6 561 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-206ENST00000556375 CRYBG2Q8N1P7 616 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 FLCNQ8NFG4 579 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 MRPS31Q92665 395 aaKnown RBP12.26□□□□□ -0.45
SLIRP-206ENST00000556375 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 SMARCD1Q96GM5 515 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 TTLL2Q9BWV7 592 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 KCNH6Q9H252 994 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 EHD2Q9NZN4 543 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 RWDD2AQ9UIY3 292 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-206ENST00000556375 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
SLIRP-206ENST00000556375 CACNA1HO95180 2353 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 HEPACAM2A8MVW5 462 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 CLDN5O00501 218 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 PMM2O15305 246 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 CILPO75339 1184 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 PRAMEF12O95522 483 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 AOC1P19801 751 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 RFX1P22670 979 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 AVPR2P30518 371 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 FMO5P49326 533 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 CLCN5P51795 746 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 MARSP56192 900 aaKnown RBP12.25□□□□□ -0.45
SLIRP-206ENST00000556375 PRKCQQ04759 706 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 FCHO2Q0JRZ9 810 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 ORC1Q13415 861 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 MLF2Q15773 248 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-206ENST00000556375 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 MFSD6LQ8IWD5 586 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 CMTM8Q8IZV2 173 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 TTC39CQ8N584 583 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 MLKLQ8NB16 471 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 IRF7Q92985 503 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 TWNKQ96RR1 684 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 MED10Q9BTT4 135 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 TRMT61BQ9BVS5 477 aaKnown RBP12.25□□□□□ -0.45
SLIRP-206ENST00000556375 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 SLC46A2Q9BY10 475 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 BRD9Q9H8M2 597 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms