RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 PARD3BQ8TEW8 1205 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
APEX1-213ENST00000556296 EXOC4Q96A65 974 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 CNOT6LQ96LI5 555 aaKnown RBP13.64□□□□□ -0.23
APEX1-213ENST00000556296 CBX8Q9HC52 389 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 OBP2AQ9NY56 170 aa13.64□□□□□ -0.23
APEX1-213ENST00000556296 TIMM13Q9Y5L4 95 aaPredicted RBP13.64□□□□□ -0.23
APEX1-213ENST00000556296 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 KCNJ18B7U540 433 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 STX10O60499 249 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 MOSPD3O75425 235 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 RETP07949 1114 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 NFICP08651 508 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 CHRNB1P11230 501 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 CDC25CP30307 473 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 ATXN1P54253 815 aaKnown RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 AMPD2Q01433 879 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 FCHO2Q0JRZ9 810 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 SIM2Q14190 667 aaPredicted RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 KCNJ12Q14500 433 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 CDKAL1Q5VV42 579 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 JADE1Q6IE81 842 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 LUZP1Q86V48 1076 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 SYNPOQ8N3V7 929 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 C2orf15Q8WU43 125 aaKnown RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 PSMG2Q969U7 264 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
APEX1-213ENST00000556296 SAMSN1Q9NSI8 373 aaKnown RBP13.63□□□□□ -0.23
APEX1-213ENST00000556296 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 VNN2O95498 520 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 TNNC2P02585 160 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 OR4Q2P0C623 313 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 TMEM191BP0C7N4 346 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
APEX1-213ENST00000556296 GTF2H1P32780 548 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
APEX1-213ENST00000556296 GUCY2FP51841 1108 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 WNT7BP56706 349 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 LILRA4P59901 499 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
APEX1-213ENST00000556296 CLDN10P78369 228 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 LONP2Q86WA8 852 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 ANKRD36BP1Q96IX9 119 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 SLC27A5Q9Y2P5 690 aa13.62□□□□□ -0.23
APEX1-213ENST00000556296 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
APEX1-213ENST00000556296 COL4A2P08572 1712 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 DCHS1Q96JQ0 3298 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 MTMR11A4FU01 709 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 NRG2O14511 850 aaPredicted RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 PPEF2O14830 753 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 PAPSS2O95340 614 aaPredicted RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 TPM2P07951 284 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 ZNF18P17022 549 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 GABRR2P28476 465 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 WEE1P30291 646 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 DLG4P78352 724 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 HSP90AA4PQ58FG1 418 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 CEP68Q76N32 757 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 TMC8Q8IU68 726 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 PLEKHO2Q8TD55 490 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 NETO1Q8TDF5 533 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 DDX1Q92499 740 aaKnown RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 SEPT5Q99719 369 aaPredicted RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 MTMR12Q9C0I1 747 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 TASP1Q9H6P5 420 aa13.61□□□□□ -0.23
APEX1-213ENST00000556296 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
APEX1-213ENST00000556296 ANO9A1A5B4 782 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 SHISA7A6NL88 538 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 SPECC1L-ADORA2AF8WAN1 911 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 ARNTLO00327 626 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 PIRO00625 290 aa13.6□□□□□ -0.23
APEX1-213ENST00000556296 ATG13O75143 517 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms