RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PLA2G2FQ9BZM2 168 aa16.16■□□□□ 0.18
ACTN1-217ENST00000556203 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-217ENST00000556203 ATP8B3O60423 1300 aa16.16■□□□□ 0.18
ACTN1-217ENST00000556203 CILPO75339 1184 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 PDGFBP01127 241 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-217ENST00000556203 F11P03951 625 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 CCDC192P0DO97 292 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 CCDC130P13994 396 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TRIM21P19474 475 aaKnown RBP16.15■□□□□ 0.18
ACTN1-217ENST00000556203 VIPR2P41587 438 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 MARSP56192 900 aaKnown RBP16.15■□□□□ 0.18
ACTN1-217ENST00000556203 BMP8AQ7Z5Y6 402 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 FAM35AQ86V20 835 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 CREBRFQ8IUR6 639 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TRIM59Q8IWR1 403 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 CRYBG2Q8N1P7 616 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 WHAMMQ8TF30 809 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TRMT2BQ96GJ1 504 aaKnown RBP16.15■□□□□ 0.18
ACTN1-217ENST00000556203 MYRFLQ96LU7 910 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 CEP295NLQ96MC4 621 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 ARID3AQ99856 593 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TASP1Q9H6P5 420 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 SLC2A4RGQ9NR83 387 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 FAM49BQ9NUQ9 324 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TMEM30AQ9NV96 361 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 DACH1Q9UI36 760 aa16.15■□□□□ 0.18
ACTN1-217ENST00000556203 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.15■□□□□ 0.18
ACTN1-217ENST00000556203 TECTAO75443 2155 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 PMM2O15305 246 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 CETN1Q12798 172 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 LRMPQ12912 555 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 GRM2Q14416 872 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 ZNF394Q53GI3 561 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 DENND5BQ6ZUT9 1274 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 PAQR9Q6ZVX9 377 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 ARID3BQ8IVW6 561 aaPredicted RBP16.14■□□□□ 0.17
ACTN1-217ENST00000556203 FUKQ8N0W3 1084 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 SIX5Q8N196 739 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 SLC2A14Q8TDB8 520 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 SMARCD1Q96GM5 515 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 TRPV4Q9HBA0 871 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 KRT82Q9NSB4 513 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 WNT16Q9UBV4 365 aa16.14■□□□□ 0.17
ACTN1-217ENST00000556203 P4HA2O15460 535 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 TADA3O75528 432 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 MBD3O95983 291 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 AFPP02771 609 aaKnown RBP16.13■□□□□ 0.17
ACTN1-217ENST00000556203 ERCC5P28715 1186 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-217ENST00000556203 USP46P62068 366 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 KCNH2Q12809 1159 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 CUL2Q13617 745 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 TPD52L1Q16890 204 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-217ENST00000556203 TXNDC8Q6A555 127 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 VITQ6UXI7 678 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 TTC39CQ8N584 583 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 MRPS31Q92665 395 aaKnown RBP16.13■□□□□ 0.17
ACTN1-217ENST00000556203 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
ACTN1-217ENST00000556203 KCNK16Q96T55 309 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 SLC46A2Q9BY10 475 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 MFSD1Q9H3U5 465 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 CA14Q9ULX7 337 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 MYO10Q9HD67 2058 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 NCANO14594 1321 aa16.13■□□□□ 0.17
ACTN1-217ENST00000556203 HEPACAM2A8MVW5 462 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 AP1G2O75843 785 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 DDX6P26196 483 aaKnown RBP eCLIP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 ADORA2BP29275 332 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 RBM43Q6ZSC3 357 aaKnown RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 SUGP1Q8IWZ8 645 aaKnown RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 FBXL6Q8N531 539 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 MAB21L3Q8N8X9 362 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 DEPDC1BQ8WUY9 529 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 E2F7Q96AV8 911 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 RSPRY1Q96DX4 576 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 NT5C1BQ96P26 610 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 HNRNPABQ99729 332 aaKnown RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 TRMT61BQ9BVS5 477 aaKnown RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 DNAI2Q9GZS0 605 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 SMG9Q9H0W8 520 aaKnown RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-217ENST00000556203 EHD2Q9NZN4 543 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
ACTN1-217ENST00000556203 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 DPYSL4O14531 572 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 BEST1O76090 585 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 PRAMEF12O95522 483 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 FAM200BP0CF97 657 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 PSMC3P17980 439 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 COL9A1P20849 921 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 TBXAS1P24557 533 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-217ENST00000556203 WEE1P30291 646 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 AVPR1AP37288 418 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 PFKPQ01813 784 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-217ENST00000556203 MON1AQ86VX9 555 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms