RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TTC30AQ86WT1 665 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SLC35F5Q8WV83 523 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 IFT81Q8WYA0 676 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SLC4A5Q9BY07 1137 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 RAB17Q9H0T7 212 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 ACBD3Q9H3P7 528 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 LRRC19Q9H756 370 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 UBN1Q9NPG3 1134 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 ATP11BQ9Y2G3 1177 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 TCRBV7S2A1N4TA0A589 114 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 ESYT3A0FGR9 886 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 ARL5CA6NH57 179 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 MGEA5O60502 916 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 RPL9P32969 192 aaKnown RBP15.5■□□□□ 0.07
VPS33B-205ENST00000556096 PTGIRP43119 386 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 SSR1P43307 286 aaKnown RBP15.5■□□□□ 0.07
VPS33B-205ENST00000556096 FNTAP49354 379 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 COPS2P61201 443 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 POLNQ7Z5Q5 900 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 TMEM110Q86TL2 294 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 ADGRF2Q8IZF7 708 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 JOSD2Q8TAC2 188 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 PGBD4Q96DM1 585 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
VPS33B-205ENST00000556096 TNIP3Q96KP6 325 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 METTL5Q9NRN9 209 aaKnown RBP15.5■□□□□ 0.07
VPS33B-205ENST00000556096 FAM114A2Q9NRY5 505 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 MIOSQ9NXC5 875 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 DDX56Q9NY93 547 aaKnown RBP15.5■□□□□ 0.07
VPS33B-205ENST00000556096 NFU1Q9UMS0 254 aa15.5■□□□□ 0.07
VPS33B-205ENST00000556096 PODXLO00592 558 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 CYB561D2O14569 222 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 PSMA2P25787 234 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 LMO2P25791 158 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 COILP38432 576 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-205ENST00000556096 CDK7P50613 346 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 DRG2P55039 364 aaKnown RBP15.49■□□□□ 0.07
VPS33B-205ENST00000556096 GPS2Q13227 327 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 SND1Q7KZF4 910 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS33B-205ENST00000556096 ANKRD52Q8NB46 1076 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 LPPQ93052 612 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 ERP44Q9BS26 406 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 DPEP3Q9H4B8 488 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 PLEKHA4Q9H4M7 779 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 CYLDQ9NQC7 956 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 ST7Q9NRC1 585 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 HOMER3Q9NSC5 361 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 FAM49BQ9NUQ9 324 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 RASAL2Q9UJF2 1139 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 ALPK3Q96L96 1907 aa15.49■□□□□ 0.07
VPS33B-205ENST00000556096 E5RJQ4 531 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 GABRDO14764 452 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 PDGFRBP09619 1106 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 CKBP12277 381 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 PTPN7P35236 360 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 RPL34P49207 117 aaKnown RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 KLF1Q13351 362 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 SMC1AQ14683 1233 aaKnown RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 TRADDQ15628 312 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 DUPD1Q68J44 220 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 PMF1Q6P1K2 205 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 TTC27Q6P3X3 843 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 CCDC137Q6PK04 289 aaKnown RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 JAMLQ86YT9 394 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 SLCO2A1Q92959 643 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 ADAM2Q99965 735 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 OSBPL8Q9BZF1 889 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 RSAD1Q9HA92 442 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 HPCAL4Q9UM19 191 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 KRT7P08729 469 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 PAX3P23760 479 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 ECHS1P30084 290 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 BCAT1P54687 386 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 TLE2Q04725 743 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 PDE4CQ08493 712 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 BST2Q10589 180 aaKnown RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 HADHQ16836 314 aaKnown RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 FAM102AQ5T9C2 384 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-205ENST00000556096 OR6B2Q6IFH4 312 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 TRAF7Q6Q0C0 670 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 FAM183BPQ6ZVS7 135 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 CCDC50Q8IVM0 306 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 TMEM86AQ8N2M4 240 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 MREGQ8N565 214 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 SENP8Q96LD8 212 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 ASNSD1Q9NWL6 643 aa15.48■□□□□ 0.07
VPS33B-205ENST00000556096 DAPK3O43293 454 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 LRCH4O75427 683 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 RALAP11233 206 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 TCF4P15884 667 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 SCNN1AP37088 669 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 SCNN1GP51170 649 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 AFF1P51825 1210 aaKnown RBP15.47■□□□□ 0.07
VPS33B-205ENST00000556096 ZNF143P52747 638 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-205ENST00000556096 CBX1P83916 185 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 SLC25A11Q02978 314 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms