RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 RETSATQ6NUM9 610 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 METTL3Q86U44 580 aaKnown RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF410Q86VK4 478 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 PALB2Q86YC2 1186 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 HES6Q96HZ4 224 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 WDCPQ9H6R7 721 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 LNPEPQ9UIQ6 1025 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 TECPR2O15040 1411 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 SDR42E2A6NKP2 422 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 O00370 1275 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 ZSCAN9O15535 394 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 URODP06132 367 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 JAK1P23458 1154 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 HUNKP57058 714 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 NUP107P57740 925 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 INHBEP58166 350 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 PKN2Q16513 984 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 ICE2Q659A1 982 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 DCLK3Q9C098 648 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM117Q9H0C3 514 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 VPS51Q9UID3 782 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 KIF1CO43896 1103 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TROAPQ12815 778 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 STK4Q13043 487 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 PPIL2Q13356 520 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 SPDYAQ5MJ70 313 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 STOX1Q6ZVD7 989 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 MAGEB10Q96LZ2 347 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM237Q96Q45 408 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 PP2D1A8MPX8 630 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 ACADSP16219 412 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 COMTP21964 271 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TGM2P21980 687 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 SLC15A2Q16348 729 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 C3orf62Q6ZUJ4 267 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 CYP4Z1Q86W10 505 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 EIF1ADQ8N9N8 165 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 AFF4Q9UHB7 1163 aaKnown RBP11.13□□□□□ -0.63
ACTN1-216ENST00000556083 TRHDEQ9UKU6 1024 aa11.13□□□□□ -0.63
ACTN1-216ENST00000556083 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 RHOBTB1O94844 696 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 RPN2P04844 631 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 ALOX15P16050 662 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 PCSK2P16519 638 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 OR1G1P47890 313 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 PCYT1AP49585 367 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 RAD23BP54727 409 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 MRPS35P82673 323 aaKnown RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 DMC1Q14565 340 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 C10orf120Q5SQS8 335 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 JADE3Q92613 823 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 SEPT5Q99719 369 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 CTNNAL1Q9UBT7 734 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 H7C0S8 307 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 TM9SF1O15321 606 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 MSCO60682 206 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 DTNBO60941 627 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 DAB1O75553 588 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 EPHB3P54753 998 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 TWF1Q12792 350 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 DNAJC7Q99615 494 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 CPVLQ9H3G5 476 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 SLIT1O75093 1534 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 SUPT3HB4E1H0 165 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 GOLGA8RI6L899 631 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 VPS4BO75351 444 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 NCAM1P13591 858 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 RARGP13631 454 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 EPHB2P29323 1055 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 KRT20P35900 424 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 HNRNPH2P55795 449 aaKnown RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 TFDP3Q5H9I0 405 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 PRMT9Q6P2P2 845 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 DSG4Q86SJ6 1040 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 MYO1HQ8N1T3 1032 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 SNX31Q8N9S9 440 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 PABPC3Q9H361 631 aaKnown RBP11.12□□□□□ -0.63
ACTN1-216ENST00000556083 RAD21L1Q9H4I0 556 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 IL1RAPL1Q9NZN1 696 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 GUCA1CO95843 209 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 HLA-DPA1P20036 260 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 NR2C2P49116 596 aa11.12□□□□□ -0.63
ACTN1-216ENST00000556083 KLC1Q07866 573 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms