RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PLEKHM1Q9Y4G2 1056 aa6.43□□□□□ -1.38
VRK1-205ENST00000555402 MARCH11A6NNE9 402 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 THAP12O43422 761 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 MGAT1P26572 445 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 IL6STP40189 918 aaPredicted RBP6.42□□□□□ -1.38
VRK1-205ENST00000555402 HALP42357 657 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 POU6F2P78424 691 aaPredicted RBP6.42□□□□□ -1.38
VRK1-205ENST00000555402 STARD3Q14849 445 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 PDCD2Q16342 344 aaPredicted RBP6.42□□□□□ -1.38
VRK1-205ENST00000555402 C4orf46Q504U0 113 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 HSP90AB4PQ58FF6 505 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 RNF44Q7L0R7 432 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 SCAMP4Q969E2 229 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 ZNF566Q969W8 418 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 A1CFQ9NQ94 594 aaKnown RBP6.42□□□□□ -1.38
VRK1-205ENST00000555402 GJB4Q9NTQ9 266 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 FAM30AQ9NZY2 134 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 PAXBP1Q9Y5B6 917 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 MORC2Q9Y6X9 1032 aaPredicted RBP6.42□□□□□ -1.38
VRK1-205ENST00000555402 FPGT-TNNI3KV9GXZ4 949 aa6.42□□□□□ -1.38
VRK1-205ENST00000555402 A0A1W2PPC4 97 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 DRGXA6NNA5 263 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 PYCARD-AS1I3L0S3 204 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 RASSF9O75901 435 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 DNAJB5O75953 348 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 C1QL1O75973 258 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 MT-ND5P03915 603 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 ANXA2P07355 339 aaKnown RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 FGFR2P21802 821 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 SLC11A2P49281 568 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 PPM1FP49593 454 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 RARRES1P49788 294 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 UCP3P55916 312 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 SIM1P81133 766 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 MAPK7Q13164 816 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 ZNF169Q14929 603 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 ELF2Q15723 593 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 FAM102AQ5T9C2 384 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 PGBD2Q6P3X8 592 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 GGT6Q6P531 493 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 UNC13DQ70J99 1090 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 BEND5Q7L4P6 421 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 C1QL2Q7Z5L3 287 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 ARHGEF25Q86VW2 580 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 MICU3Q86XE3 530 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 FAM46DQ8NEK8 389 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 TMIEQ8NEW7 156 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 CCT6BQ92526 530 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 TINAGL1Q9GZM7 467 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 GPR35Q9HC97 309 aa6.41□□□□□ -1.38
VRK1-205ENST00000555402 USP15Q9Y4E8 981 aaPredicted RBP6.41□□□□□ -1.38
VRK1-205ENST00000555402 hCG_1642624A0A1W2PR95 340 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 LRRC3CA6NJW4 275 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 TMEM233B4DJY2 109 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 ADAMTS3O15072 1205 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 KIF20AO95235 890 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 CHEK2O96017 543 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 CHKAP35790 457 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 CARSP49589 748 aaKnown RBP6.4□□□□□ -1.38
VRK1-205ENST00000555402 METRNLQ641Q3 311 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 SDR16C5Q8N3Y7 309 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 ZNF366Q8N895 744 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
VRK1-205ENST00000555402 ZNF527Q8NB42 609 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 MYRIPQ8NFW9 859 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 IPCEF1Q8WWN9 437 aaPredicted RBP6.4□□□□□ -1.38
VRK1-205ENST00000555402 KLHL32Q96NJ5 620 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 SCLT1Q96NL6 688 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 C1QTNF7Q9BXJ2 289 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 REXO4Q9GZR2 422 aaKnown RBP6.4□□□□□ -1.38
VRK1-205ENST00000555402 TBC1D23Q9NUY8 699 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 MYO1AQ9UBC5 1043 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 HDAC9Q9UKV0 1011 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 AGAP1Q9UPQ3 857 aa6.4□□□□□ -1.38
VRK1-205ENST00000555402 A0A087WV62 115 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 NPHP1O15259 732 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 VPS4BO75351 444 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 PIM1P11309 404 aaPredicted RBP6.39□□□□□ -1.39
VRK1-205ENST00000555402 CKBP12277 381 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 EEF1GP26641 437 aaKnown RBP6.39□□□□□ -1.39
VRK1-205ENST00000555402 HSPA7P48741 367 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 ZNF81P51508 661 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 CHN2P52757 468 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 HTRA4P83105 476 aaPredicted RBP6.39□□□□□ -1.39
VRK1-205ENST00000555402 ICA1Q05084 483 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 SCAPQ12770 1279 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 SLC35G1Q2M3R5 365 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 DCAF12L1Q5VU92 463 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 RRAGBQ5VZM2 374 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 ARMC6Q6NXE6 501 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 PDPRQ8NCN5 879 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 OR56A3Q8NH54 315 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 PPM1EQ8WY54 764 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 RAPGEF4Q8WZA2 1011 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 LRRC46Q96FV0 321 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 TMEM41AQ96HV5 264 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 CNPPD1Q9BV87 410 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms