RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CYP27A1Q02318 531 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 RAB33AQ14088 237 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 MDH1BQ5I0G3 518 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SLC8B1Q6J4K2 584 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 RRAGAQ7L523 313 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 LRRTM3Q86VH5 581 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 PPM1KQ8N3J5 372 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ATAD1Q8NBU5 361 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SLC7A14Q8TBB6 771 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TAF4BQ92750 862 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NT5C1BQ96P26 610 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 RHOBTB2Q9BYZ6 727 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NHEJ1Q9H9Q4 299 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TMLHEQ9NVH6 421 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ZNF446Q9NWS9 450 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 CLEC1BQ9P126 229 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 HMGXB4Q9UGU5 601 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 GTF3C4Q9UKN8 822 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NME7Q9Y5B8 376 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 CCDC195A0A1B0GUA6 201 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 MYBPHLA2RUH7 354 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 CCDC151A5D8V7 595 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 MAP3K13O43283 966 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 TBC1D4O60343 1298 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 LCA5LO95447 670 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 C8AP07357 584 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 PCSK1P29120 753 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 NDST1P52848 882 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 AMPD2Q01433 879 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 DUSP4Q13115 394 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 MGAT5BQ3V5L5 792 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 PPM1LQ5SGD2 360 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 TEX35Q5T0J7 233 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 CCDC122Q5T0U0 273 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 SMYD5Q6GMV2 418 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 ANKRD54Q6NXT1 300 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 GJB7Q6PEY0 223 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 GBP6Q6ZN66 633 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 KIAA1328Q86T90 577 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 ACOT1Q86TX2 421 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 ARHGEF19Q8IW93 802 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 DCP1BQ8IZD4 617 aaKnown RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 MSANTD4Q8NCY6 345 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 HNRNPLLQ8WVV9 542 aaKnown RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 SYN2Q92777 582 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 KAT5Q92993 513 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 RPGRIP1Q96KN7 1286 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 SEPT5Q99719 369 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-213ENST00000555386 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 CD207Q9UJ71 328 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 MYO6Q9UM54 1294 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
PSEN1-213ENST00000555386 A0A0U1RQJ8 604 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CTAGE15A4D2H0 777 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CLDN5O00501 218 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 GABRDO14764 452 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 TACC1O75410 805 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CTAGE8P0CG41 777 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 KCNQ1P51787 676 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 VAV2P52735 878 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CUL2Q13617 745 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 KCNC3Q14003 757 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 SPA17Q15506 151 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 ARHGAP44Q17R89 818 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 EXOC3L4Q17RC7 722 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 SDHAF4Q5VUM1 108 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 PAPD7Q5XG87 772 aaKnown RBP10.47□□□□□ -0.73
PSEN1-213ENST00000555386 LILRA6Q6PI73 481 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 ELMSAN1Q6PJG2 1045 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CTAGE6Q86UF2 777 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 SPATA2LQ8IUW3 424 aaPredicted RBP10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CTAGE4Q8IX94 777 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 GPR65Q8IYL9 337 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 STKLD1Q8NE28 680 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 GPR152Q8TDT2 470 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 ATRIPQ8WXE1 791 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 JAKMIP2Q96AA8 810 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CCDC42Q96M95 316 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 ACBD6Q9BR61 282 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 MED10Q9BTT4 135 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 LSM14BQ9BX40 385 aaKnown RBP10.47□□□□□ -0.73
PSEN1-213ENST00000555386 PARD6BQ9BYG5 372 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CRISPLD1Q9H336 500 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 ARFGAP3Q9NP61 516 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 UBE2TQ9NPD8 197 aaPredicted RBP10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CRTAC1Q9NQ79 661 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CISHQ9NSE2 258 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms