RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 SYNCQ9H7C4 482 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 ABCB6Q9NP58 842 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 WDR35Q9P2L0 1181 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 PCDHB5Q9Y5E4 795 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 AP1G2O75843 785 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 CTSAP10619 480 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 ABCB4P21439 1286 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 PDE4CQ08493 712 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 GPR17Q13304 367 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 SLC8B1Q6J4K2 584 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 PRSS55Q6UWB4 352 aaPredicted RBP15.18■□□□□ 0.02
SHOX2-206ENST00000554685 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 WDTC1Q8N5D0 677 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 SLC35F5Q8WV83 523 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 RFFLQ8WZ73 363 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 ZNF653Q96CK0 615 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 B3GALT6Q96L58 329 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 ZBP1Q9H171 429 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 MRPL47Q9HD33 250 aaKnown RBP15.18■□□□□ 0.02
SHOX2-206ENST00000554685 PNPLA8Q9NP80 782 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 AVENQ9NQS1 362 aaPredicted RBP15.18■□□□□ 0.02
SHOX2-206ENST00000554685 FNIP2Q9P278 1114 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 UVRAGQ9P2Y5 699 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 SCINQ9Y6U3 715 aa15.18■□□□□ 0.02
SHOX2-206ENST00000554685 NCANO14594 1321 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 LPXNO60711 386 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 TUBB4AP04350 444 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 CA3P07451 260 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 MAGEA11P43364 429 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 GSCP56915 257 aaPredicted RBP15.17■□□□□ 0.02
SHOX2-206ENST00000554685 TPGS2Q68CL5 300 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 MMS22LQ6ZRQ5 1243 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 PAQR9Q6ZVX9 377 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 LRRTM3Q86VH5 581 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 TDHQ8IZJ6 230 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
SHOX2-206ENST00000554685 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 LPIN3Q9BQK8 851 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 C11orf70Q9BRQ4 267 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 THAP2Q9H0W7 228 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 CSNK1G1Q9HCP0 422 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
SHOX2-206ENST00000554685 LZTFL1Q9NQ48 299 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 ST7Q9NRC1 585 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
SHOX2-206ENST00000554685 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 CDY1Q9Y6F8 540 aa15.17■□□□□ 0.02
SHOX2-206ENST00000554685 GRXCR1A8MXD5 290 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 KIF2AO00139 706 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-206ENST00000554685 CLDN5O00501 218 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 C2CD2LO14523 706 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 TRIM66O15016 1216 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 KIF5CO60282 957 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 CYP1A2P05177 515 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 OR4Q2P0C623 313 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 BDNFP23560 247 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 ARHGAP25P42331 645 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 GABRB2P47870 512 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 ARPP19P56211 112 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 ERVK-21P61565 698 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 TAP1Q03518 808 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 ZNF268Q14587 947 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-206ENST00000554685 TCEAL1Q15170 157 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 PTPN20Q4JDL3 420 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 FAM109BQ6ICB4 259 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-206ENST00000554685 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
SHOX2-206ENST00000554685 CLEC20AQ6ZU45 233 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 TMC7Q7Z402 723 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 KCTD13Q8WZ19 329 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 SLC4A5Q9BY07 1137 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 LACRTQ9GZZ8 138 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 RXFP1Q9HBX9 757 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 TMLHEQ9NVH6 421 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-206ENST00000554685 HSFX1Q9UBD0 423 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 GUCA1BQ9UMX6 200 aa15.16■□□□□ 0.02
SHOX2-206ENST00000554685 RCCD1A6NED2 376 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 USP27XA6NNY8 438 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 ZNF500O60304 480 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 OR1D2P34982 312 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 SCNN1AP37088 669 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 NDUFV1P49821 464 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 HADHBP55084 474 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms