RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 MAB21L3Q8N8X9 362 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 BPIFB1Q8TDL5 484 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 MYLPFQ96A32 169 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 RSPRY1Q96DX4 576 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 PCED1BQ96HM7 432 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 IER2Q9BTL4 223 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 GTPBP4Q9BZE4 634 aaKnown RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 SEMA4AQ9H3S1 761 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 KIF9Q9HAQ2 790 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 TDP1Q9NUW8 608 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 RMND1Q9NWS8 449 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 HOOK1Q9UJC3 728 aaKnown RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 FBXO4Q9UKT5 387 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 MTF2Q9Y483 593 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 PIAS3Q9Y6X2 628 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 COL4A3Q01955 1670 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 FAM186AA6NE01 2351 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
ACTN1-213ENST00000554508 DMDP11532 3685 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 NCANO14594 1321 aa9.31□□□□□ -0.92
ACTN1-213ENST00000554508 ATG2BQ96BY7 2078 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 SHISA7A6NL88 538 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 LAMTOR5O43504 91 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 LRRN2O75325 713 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 CLSTN1O94985 981 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 SMC2O95347 1197 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 VNN1O95497 513 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 KRT13P13646 458 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 PFKLP17858 780 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 TRIM21P19474 475 aaKnown RBP9.3□□□□□ -0.92
ACTN1-213ENST00000554508 PPP3CCP48454 512 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 PDE6CP51160 858 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 VAMP7P51809 220 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 KPNA1P52294 538 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-213ENST00000554508 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-213ENST00000554508 DLG4P78352 724 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 FAM160A1Q05DH4 1040 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 ADAM9Q13443 819 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 FZD5Q13467 585 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 EDRF1Q3B7T1 1238 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 ZNF528Q3MIS6 628 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 MDH1BQ5I0G3 518 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 TXNDC8Q6A555 127 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 DENND5BQ6ZUT9 1274 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 SV2AQ7L0J3 742 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 RALGPS2Q86X27 583 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-213ENST00000554508 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 ENGASEQ8NFI3 743 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 FAM3CQ92520 227 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 NKD2Q969F2 451 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-213ENST00000554508 TNIP3Q96KP6 325 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 C8orf48Q96LL4 319 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 LRRC3BQ96PB8 259 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 GSDMAQ96QA5 445 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 ELOVL4Q9GZR5 314 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 MYO15AQ9UKN7 3530 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 ATP8B3O60423 1300 aa9.3□□□□□ -0.92
ACTN1-213ENST00000554508 GFRA3O60609 400 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 GADD45BO75293 160 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 AKAP3O75969 853 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 PRAMEF12O95522 483 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ASS1P00966 412 aaKnown RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 SP9P0CG40 484 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 CCNE1P24864 410 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 GTF2H1P32780 548 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 PNOCQ13519 176 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 CCDC142Q17RM4 750 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 COBLL1Q53SF7 1204 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 C1orf220Q5T0J3 134 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ZNF658Q5TYW1 1059 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ZC3H14Q6PJT7 736 aaKnown RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 FRMD5Q7Z6J6 570 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 UNC93AQ86WB7 457 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 B3GALNT2Q8NCR0 500 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 USP13Q92995 863 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 TTLL2Q9BWV7 592 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 IMPG2Q9BZV3 1241 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 LMAN1LQ9HAT1 526 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 GKN1Q9NS71 199 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 SPATA6Q9NWH7 488 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 TRPM5Q9NZQ8 1165 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 NDRG2Q9UN36 371 aaKnown RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 NME7Q9Y5B8 376 aa9.29□□□□□ -0.92
ACTN1-213ENST00000554508 ZFHX2Q9C0A1 2572 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-213ENST00000554508 USP34Q70CQ2 3546 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 PRR23AA6NEV1 266 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 F8VP50 259 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms