RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PHLDB3Q6NSJ2 640 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 VITQ6UXI7 678 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TMEM150AQ86TG1 271 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TMEM105Q8N8V8 129 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 CCDC150Q8NCX0 1101 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TNIP3Q96KP6 325 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 SPATA17Q96L03 361 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TRMT61BQ9BVS5 477 aaKnown RBP13.92□□□□□ -0.18
SHMT2-211ENST00000554310 PLA2G2FQ9BZM2 168 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 NIF3L1Q9GZT8 377 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 BRD9Q9H8M2 597 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 OBP2AQ9NY56 170 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TICRRQ7Z2Z1 1910 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 ZNF638Q14966 1978 aaKnown RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 F11P03951 625 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 TRIM21P19474 475 aaKnown RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 BDNFP23560 247 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 CCNE1P24864 410 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 PTPN5P54829 565 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 STARD6P59095 220 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 FCHO2Q0JRZ9 810 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 MORC3Q14149 939 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 GRM2Q14416 872 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 ANKRD40Q6AI12 368 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 UNC93AQ86WB7 457 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 ARID3BQ8IVW6 561 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 MFSD6LQ8IWD5 586 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 STKLD1Q8NE28 680 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 MRPS31Q92665 395 aaKnown RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 IRF7Q92985 503 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 C8orf48Q96LL4 319 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 BCO2Q9BYV7 579 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 SDCBP2Q9H190 292 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 DPEP3Q9H4B8 488 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 TRPV5Q9NQA5 729 aa13.91□□□□□ -0.18
SHMT2-211ENST00000554310 MAGED2Q9UNF1 606 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-211ENST00000554310 NCANO14594 1321 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 ANAPC1Q9H1A4 1944 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 DPYSL4O14531 572 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-211ENST00000554310 PRAMEF12O95522 483 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 AVPR1AP37288 418 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 GRIK1P39086 918 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 CDH8P55286 799 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 INCA1Q0VD86 236 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 SLC44A4Q53GD3 710 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 DCAF17Q5H9S7 520 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-211ENST00000554310 IER5LQ5T953 404 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 YAF2Q8IY57 180 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 PRSS33Q8NF86 280 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 FAXDC2Q96IV6 333 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 CEP63Q96MT8 703 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 DDX23Q9BUQ8 820 aaKnown RBP13.9□□□□□ -0.18
SHMT2-211ENST00000554310 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 CYP3A43Q9HB55 503 aa13.9□□□□□ -0.18
SHMT2-211ENST00000554310 ARMCX3Q9UH62 379 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-211ENST00000554310 HELZP42694 1942 aaKnown RBP13.9□□□□□ -0.18
SHMT2-211ENST00000554310 COL4A3Q01955 1670 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 F8VP50 259 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 STK25O00506 426 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 ZNF263O14978 683 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 TADA3O75528 432 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 BMP6P22004 513 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 GDI1P31150 447 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 TCERG1LQ5VWI1 586 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 ISM2Q6H9L7 571 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 TPRG1Q6ZUI0 275 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 MON1AQ86VX9 555 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 CCDC105Q8IYK2 499 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 CELF5Q8N6W0 485 aaKnown RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 FBXL13Q8NEE6 735 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 PJA1Q8NG27 643 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 RSPRY1Q96DX4 576 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 SMARCD1Q96GM5 515 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 PPP1R9BQ96SB3 815 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 TTLL2Q9BWV7 592 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 SLC46A2Q9BY10 475 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 B3GNT5Q9BYG0 378 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 DNAI2Q9GZS0 605 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms