RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 CNGA2Q16280 664 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 INSCQ1MX18 579 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 AKNAD1Q5T1N1 836 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 TMEM63BQ5T3F8 832 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 ARHGAP40Q5TG30 622 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 RNF220Q5VTB9 566 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 KIAA1614Q5VZ46 1190 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 CYB5RLQ6IPT4 315 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 SWSAP1Q6NVH7 229 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 SLC15A4Q8N697 577 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 SOCS4Q8WXH5 440 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 TTC17Q96AE7 1141 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 NT5C1BQ96P26 610 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 BTBD1Q9H0C5 482 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 GLOD4Q9HC38 313 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 SERHLQ9NQF3 203 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 TRMT13Q9NUP7 481 aaKnown RBP4.1□□□□□ -1.75
VRK1-202ENST00000553683 OBP2AQ9NY56 170 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 AFF4Q9UHB7 1163 aaKnown RBP4.1□□□□□ -1.75
VRK1-202ENST00000553683 GABRQQ9UN88 632 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 WNT6Q9Y6F9 365 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 SPATA31A6Q5VVP1 1343 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 VSTM5A8MXK1 200 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 M0R3H8 397 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 TPP1O14773 563 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 MGEA5O60502 916 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 INMTO95050 263 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 CSF1RP07333 972 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 IL6RP08887 468 aaPredicted RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 DLDP09622 509 aaKnown RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 FAM163BP0C2L3 166 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 NDUFB7P17568 137 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 RHCEP18577 417 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 DRD4P21917 467 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 KCNA3P22001 575 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 RHDQ02161 417 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 CCDC142Q17RM4 750 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 TBC1D25Q3MII6 688 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 PLA1AQ53H76 456 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 RGS7BPQ6MZT1 257 aaPredicted RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 CEP85Q6P2H3 762 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 PARS2Q7L3T8 475 aaKnown RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 MICU3Q86XE3 530 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 SLC15A3Q8IY34 581 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 FBXO41Q8TF61 875 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 NTN5Q8WTR8 489 aaPredicted RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 SPSB4Q96A44 273 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 PPP1R9BQ96SB3 815 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 MS4A7Q9GZW8 240 aaPredicted RBP4.09□□□□□ -1.75
VRK1-202ENST00000553683 FAM83DQ9H4H8 585 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 SERTAD3Q9UJW9 196 aa4.09□□□□□ -1.75
VRK1-202ENST00000553683 LOC102723971A0A1B0GUV8 181 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 JTBO76095 146 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 SUMO3P55854 103 aaPredicted RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 C21orf58P58505 322 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 FMO1Q01740 532 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 KRT17Q04695 432 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 SEMA5AQ13591 1074 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 CERCAMQ5T4B2 595 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 TSTD2Q5T7W7 516 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 FRMPD2Q68DX3 1309 aaPredicted RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 SUMO4Q6EEV6 95 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 CCDC149Q6ZUS6 474 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 MAVSQ7Z434 540 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 DGKHQ86XP1 1220 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 ABRAQ8N0Z2 381 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 SDR16C5Q8N3Y7 309 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 HASPINQ8TF76 798 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 OSCP1Q8WVF1 389 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 IPCEF1Q8WWN9 437 aaPredicted RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 MAML1Q92585 1016 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 PCSK5Q92824 1860 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 ZC3H10Q96K80 434 aaKnown RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 C8orf48Q96LL4 319 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 ARHGEF17Q96PE2 2063 aaPredicted RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 STRBPQ96SI9 672 aaKnown RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 TRIM5Q9C035 493 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 NUP62CLQ9H1M0 184 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 CXorf36Q9H7Y0 433 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 CPNE5Q9HCH3 593 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 TRIM36Q9NQ86 728 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 DDX21Q9NR30 783 aaKnown RBP eCLIP4.08□□□□□ -1.76
VRK1-202ENST00000553683 GEMIN8Q9NWZ8 242 aaKnown RBP4.08□□□□□ -1.76
VRK1-202ENST00000553683 KLHL42Q9P2K6 505 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 DKK3Q9UBP4 350 aa4.08□□□□□ -1.76
VRK1-202ENST00000553683 USP19O94966 1318 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 A1L4Q6 167 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 A6NNZ2 444 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 PYCARD-AS1I3L0S3 204 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 KIF3BO15066 747 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 JUPP14923 745 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 BRAFP15056 766 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ATF3P18847 181 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 PTH2RP49190 550 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 BCAT1P54687 386 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 CCNIQ14094 377 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms