RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PRR23AA6NEV1 266 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 A8MXQ7 604 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 F8VP50 259 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 TACC1O75410 805 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 PTPN1P18031 435 aaKnown RBP19.45■□□□□ 0.7
SHMT2-206ENST00000553529 GRIK1P39086 918 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 GCLMP48507 274 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 MTAPQ13126 283 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 ZNF852Q6ZMS4 543 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 Q6ZS52 159 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 PAQR9Q6ZVX9 377 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 SV2AQ7L0J3 742 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 YAF2Q8IY57 180 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 MYCBPAPQ8TBZ2 947 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 TAS1R2Q8TE23 839 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 FAM3CQ92520 227 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 GCNAQ96QF7 691 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 TWNKQ96RR1 684 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 BCO2Q9BYV7 579 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 GPR88Q9GZN0 384 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 CACNA1IQ9P0X4 2223 aa19.45■□□□□ 0.7
SHMT2-206ENST00000553529 CACNA1HO95180 2353 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 TRIM49BA6NDI0 452 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 ANTXRLA6NF34 631 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 DPYSL4O14531 572 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 CHADO15335 359 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 HLA-DRAP01903 254 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 CSH1P0DML2 217 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 CSH2P0DML3 217 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 CCDC130P13994 396 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 ZACNQ401N2 412 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 ACOT1Q86TX2 421 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 ARL14EPQ8N8R7 260 aaPredicted RBP19.44■□□□□ 0.7
SHMT2-206ENST00000553529 GOLGA5Q8TBA6 731 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 BPIFB1Q8TDL5 484 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 KCNK16Q96T55 309 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 EBF3Q9H4W6 596 aa19.44■□□□□ 0.7
SHMT2-206ENST00000553529 POLR3BQ9NW08 1133 aaPredicted RBP19.44■□□□□ 0.7
SHMT2-206ENST00000553529 CALUO43852 315 aaPredicted RBP19.43■□□□□ 0.7
SHMT2-206ENST00000553529 BEST1O76090 585 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 STAU1O95793 577 aaKnown RBP19.43■□□□□ 0.7
SHMT2-206ENST00000553529 MYL1P05976 194 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 PRCPP42785 496 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 ASPAP45381 313 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 PGFP49763 221 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 VAMP7P51809 220 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 RPL10AP62906 217 aaKnown RBP19.43■□□□□ 0.7
SHMT2-206ENST00000553529 KCNB1Q14721 858 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 PON2Q15165 354 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 B3GALNT2Q8NCR0 500 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 SPATA18Q8TC71 538 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
SHMT2-206ENST00000553529 CLDN23Q96B33 292 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 MYRFLQ96LU7 910 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 LMAN1LQ9HAT1 526 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 GKN1Q9NS71 199 aa19.43■□□□□ 0.7
SHMT2-206ENST00000553529 HELZP42694 1942 aaKnown RBP19.43■□□□□ 0.7
SHMT2-206ENST00000553529 PROB1E7EW31 1015 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 SPECC1L-ADORA2AF8WAN1 911 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 FGF19O95750 216 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 CHRNB1P11230 501 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 CTHP32929 405 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 MAGEA11P43364 429 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 KPNA1P52294 538 aaPredicted RBP19.42■□□□□ 0.7
SHMT2-206ENST00000553529 CSTF1Q05048 431 aaKnown RBP19.42■□□□□ 0.7
SHMT2-206ENST00000553529 ZNF667Q5HYK9 610 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 PKN3Q6P5Z2 889 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 C4orf50Q6ZRC1 276 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 MON1AQ86VX9 555 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 FAM186BQ8IYM0 893 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 GUF1Q8N442 669 aaKnown RBP19.42■□□□□ 0.7
SHMT2-206ENST00000553529 C12orf29Q8N999 325 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 CSGALNACT1Q8TDX6 532 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 SEMA4DQ92854 862 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 TRMT2BQ96GJ1 504 aaKnown RBP19.42■□□□□ 0.7
SHMT2-206ENST00000553529 FUBP3Q96I24 572 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHMT2-206ENST00000553529 FAM49BQ9NUQ9 324 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 GCNT4Q9P109 453 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 PCDHA5Q9Y5H7 936 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 WNT6Q9Y6F9 365 aa19.42■□□□□ 0.7
SHMT2-206ENST00000553529 CD44P16070 742 aaKnown RBP19.41■□□□□ 0.7
SHMT2-206ENST00000553529 ATICP31939 592 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 AVPR1AP37288 418 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 NDST1P52848 882 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 DMWDQ09019 674 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 FAM35AQ86V20 835 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 CELF5Q8N6W0 485 aaKnown RBP19.41■□□□□ 0.7
SHMT2-206ENST00000553529 SCAMP5Q8TAC9 235 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 TMC2Q8TDI7 906 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 TMEM174Q8WUU8 243 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 MRPS31Q92665 395 aaKnown RBP19.41■□□□□ 0.7
SHMT2-206ENST00000553529 FAM83CQ9BQN1 747 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 RNF38Q9H0F5 515 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 VRTNQ9H8Y1 702 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
SHMT2-206ENST00000553529 TRPV5Q9NQA5 729 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 FRMD4BQ9Y2L6 1034 aa19.41■□□□□ 0.7
SHMT2-206ENST00000553529 ASS1P00966 412 aaKnown RBP19.4■□□□□ 0.7
SHMT2-206ENST00000553529 NUCB2P80303 420 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms